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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. SNRPF, Small nuclear ribonucleoprotein polypeptide F
Sequence ID:NM_003095
Entrez Gene ID:6636
Ensembl ID:ENSG00000139343

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q23.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 96252746 - 96259849

NM_003095 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3051263Full LengthBC002505small nuclear ribonucleoprotein polypeptide F
5176590Full LengthBC063397small nuclear ribonucleoprotein polypeptide F
40123237Full LengthBC128452small nuclear ribonucleoprotein polypeptide F
40123239Full LengthBC128453small nuclear ribonucleoprotein polypeptide F

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003086  

Protein Infomation

NM_003095 NP_003086 P62306 LSM

Related Sequences

BC002505 AAH02505 P62306
BC063397 AAH63397 P62306
BC128452 AAI28453 P62306
BC128453 AAI28454 P62306
AK311752 BAG34695 P62306
X85372 CAA59688 P62306
CR456751 CAG33032 P62306

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens SNRPF NP_003086 M.musculus Snrpf 69878 Gene Info NP_081522 100
R.norvegicus Snrpf 680737   NP_001119563 100
A.thaliana RUXF 829145   NP_194751 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta