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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CBX4, Chromobox homolog 4
Sequence ID:NM_003655
Entrez Gene ID:8535
Ensembl ID:ENSG00000141582

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 77807737 - 77813229

NM_003655 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
822467780695577809193
224723137780944477809510
231423797781163577811700
238024237781280977812852
242426557781298177813212

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4856728Full LengthBC014967chromobox homolog 4 (Pc class homolog, Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003646  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003655 NP_003646 O00257 Chromo

Related Sequences

 
mRNAGenPeptSwissProt
U94344 AAB62734 O00257
AF013956 AAB80718 O00257
BC014967 AAH14967 O00257
AY390430 AAQ97596 O00257
EU439707 ACA49234 O00257

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CBX4 NP_003646 M.musculus Cbx4 12418 Gene Info NP_031651 91
R.norvegicus Cbx4 501403   XP_576815 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta