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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

Expand Gene List:




[Full Text]

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
7p22 add(7)(p22) Mantle cell lymphoma    
7q11 del(7)(q11) Mantle cell lymphoma    
7q22 del(7)(q22) Mantle cell lymphoma    
7q22 del(7)(q22q32) Mantle cell lymphoma    
7q32 del(7)(q22q32) Mantle cell lymphoma    
7q32 del(7)(q32) Mantle cell lymphoma    
7q36 add(7)(q36) Mantle cell lymphoma    

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+2 Mantle cell lymphoma    
+3 Mantle cell lymphoma   40   
+4 Mantle cell lymphoma    
+5 Mantle cell lymphoma    
+6 Mantle cell lymphoma    
+7 Mantle cell lymphoma   15   
+8 Mantle cell lymphoma   10   
+9 Mantle cell lymphoma    
+10 Mantle cell lymphoma    
+11 Mantle cell lymphoma    
+12 Mantle cell lymphoma   20   
+13 Mantle cell lymphoma    
+14 Mantle cell lymphoma    
+15 Mantle cell lymphoma    
+16 Mantle cell lymphoma    
+17 Mantle cell lymphoma    
+18 Mantle cell lymphoma   16   
+19 Mantle cell lymphoma    
+20 Mantle cell lymphoma    
+21 Mantle cell lymphoma   11   
+22 Mantle cell lymphoma    
+X Mantle cell lymphoma    
+Y Mantle cell lymphoma    

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Mantle cell lymphoma   24   
-2 Mantle cell lymphoma   17   
-3 Mantle cell lymphoma    
-4 Mantle cell lymphoma   22   
-5 Mantle cell lymphoma   18   
-6 Mantle cell lymphoma   24   
-7 Mantle cell lymphoma   12   
-8 Mantle cell lymphoma   45   
-9 Mantle cell lymphoma   58   
-10 Mantle cell lymphoma   38   
-11 Mantle cell lymphoma   30   
-12 Mantle cell lymphoma   27   
-13 Mantle cell lymphoma   92   
-14 Mantle cell lymphoma   36   
-15 Mantle cell lymphoma   50   
-16 Mantle cell lymphoma   18   
-17 Mantle cell lymphoma   46   
-18 Mantle cell lymphoma   24   
-19 Mantle cell lymphoma   14   
-20 Mantle cell lymphoma   27   
-21 Mantle cell lymphoma   38   
-22 Mantle cell lymphoma   43   
-X Mantle cell lymphoma   38   
-Y Mantle cell lymphoma   59