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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

Expand Gene List:




[Full Text]

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
11p15 add(11)(p15) Chordoma Skeleton  
11q25 add(11)(q25) Chordoma Skeleton  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Chordoma Skeleton  
+2 Chordoma Skeleton  
+5 Chordoma Skeleton  
+6 Chordoma Skeleton  
+7 Chordoma Skeleton  
+8 Chordoma Skeleton  
+12 Chordoma Skeleton  
+19 Chordoma Skeleton  
+20 Chordoma Skeleton  
+21 Chordoma Skeleton  
+22 Chordoma Skeleton  

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Chordoma Skeleton  
-2 Chordoma Skeleton  
-3 Chordoma Skeleton 20   
-4 Chordoma Skeleton 15   
-5 Chordoma Skeleton  
-6 Chordoma Skeleton  
-8 Chordoma Skeleton  
-9 Chordoma Skeleton  
-10 Chordoma Skeleton 14   
-11 Chordoma Skeleton  
-12 Chordoma Skeleton  
-13 Chordoma Skeleton 14   
-14 Chordoma Skeleton 11   
-15 Chordoma Skeleton  
-16 Chordoma Skeleton  
-17 Chordoma Skeleton  
-18 Chordoma Skeleton 13   
-19 Chordoma Skeleton  
-20 Chordoma Skeleton  
-21 Chordoma Skeleton  
-22 Chordoma Skeleton 11   
-X Chordoma Skeleton  
-Y Chordoma Skeleton 10