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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

Expand Gene List:




[Full Text]

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
11p11 del(11)(p11) Osteosarcoma, NOS Skeleton  
11p12 add(11)(p12) Osteosarcoma, NOS Skeleton  
11p13 add(11)(p13) Osteosarcoma, NOS Skeleton  
11p15 add(11)(p15) Osteosarcoma, NOS Skeleton 13   
11p15 del(11)(p15) Osteosarcoma, NOS Skeleton  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Osteosarcoma, NOS Skeleton  
+2 Osteosarcoma, NOS Skeleton 11   
+3 Osteosarcoma, NOS Skeleton  
+4 Osteosarcoma, NOS Skeleton  
+5 Osteosarcoma, NOS Skeleton  
+6 Osteosarcoma, NOS Skeleton 10   
+7 Osteosarcoma, NOS Skeleton 15   
+8 Osteosarcoma, NOS Skeleton 10   
+9 Osteosarcoma, NOS Skeleton  
+11 Osteosarcoma, NOS Skeleton  
+12 Osteosarcoma, NOS Skeleton  
+13 Osteosarcoma, NOS Skeleton  
+14 Osteosarcoma, NOS Skeleton  
+15 Osteosarcoma, NOS Skeleton  
+16 Osteosarcoma, NOS Skeleton  
+17 Osteosarcoma, NOS Skeleton  
+18 Osteosarcoma, NOS Skeleton  
+19 Osteosarcoma, NOS Skeleton  
+20 Osteosarcoma, NOS Skeleton 15   
+21 Osteosarcoma, NOS Skeleton 15   
+22 Osteosarcoma, NOS Skeleton  
+X Osteosarcoma, NOS Skeleton  
+Y Osteosarcoma, NOS Skeleton  

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Osteosarcoma, NOS Skeleton 12   
-2 Osteosarcoma, NOS Skeleton 20   
-3 Osteosarcoma, NOS Skeleton 30   
-4 Osteosarcoma, NOS Skeleton 32   
-5 Osteosarcoma, NOS Skeleton 31   
-6 Osteosarcoma, NOS Skeleton 24   
-7 Osteosarcoma, NOS Skeleton 17   
-8 Osteosarcoma, NOS Skeleton 30   
-9 Osteosarcoma, NOS Skeleton 42   
-10 Osteosarcoma, NOS Skeleton 45   
-11 Osteosarcoma, NOS Skeleton 17   
-12 Osteosarcoma, NOS Skeleton 23   
-13 Osteosarcoma, NOS Skeleton 51   
-14 Osteosarcoma, NOS Skeleton 28   
-15 Osteosarcoma, NOS Skeleton 38   
-16 Osteosarcoma, NOS Skeleton 28   
-17 Osteosarcoma, NOS Skeleton 42   
-18 Osteosarcoma, NOS Skeleton 33   
-19 Osteosarcoma, NOS Skeleton 35   
-20 Osteosarcoma, NOS Skeleton 25   
-21 Osteosarcoma, NOS Skeleton 24   
-22 Osteosarcoma, NOS Skeleton 37   
-X Osteosarcoma, NOS Skeleton 27   
-Y Osteosarcoma, NOS Skeleton 13