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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

Expand Gene List:




[Full Text]

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
11p11 add(11)(p11) Adenocarcinoma Ovary  
11p11 del(11)(p11) Adenocarcinoma Ovary  
11p13 add(11)(p13) Adenocarcinoma Ovary  
11p13 del(11)(p13) Adenocarcinoma Ovary  
11p14 add(11)(p14) Adenocarcinoma Ovary  
11p14 del(11)(p14) Adenocarcinoma Ovary  
11p15 add(11)(p15) Adenocarcinoma Ovary 33   
11q10 i(11)(q10) Adenocarcinoma Ovary  
11q13 der(19)t(11;19)(q13;p13) Adenocarcinoma Ovary  
11q14 add(11)(q14) Adenocarcinoma Ovary  
11q23 add(11)(q23) Adenocarcinoma Ovary 13   
11q23 del(11)(q23) Adenocarcinoma Ovary  
11q25 add(11)(q25) Adenocarcinoma Ovary  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Adenocarcinoma Ovary 38   
+2 Adenocarcinoma Ovary 36   
+3 Adenocarcinoma Ovary 43   
+4 Adenocarcinoma Ovary  
+5 Adenocarcinoma Ovary 24   
+6 Adenocarcinoma Ovary 13   
+7 Adenocarcinoma Ovary 42   
+8 Adenocarcinoma Ovary 23   
+9 Adenocarcinoma Ovary 13   
+10 Adenocarcinoma Ovary 18   
+11 Adenocarcinoma Ovary 19   
+12 Adenocarcinoma Ovary 69   
+13 Adenocarcinoma Ovary 15   
+14 Adenocarcinoma Ovary 14   
+15 Adenocarcinoma Ovary  
+16 Adenocarcinoma Ovary 14   
+17 Adenocarcinoma Ovary  
+18 Adenocarcinoma Ovary  
+19 Adenocarcinoma Ovary 17   
+20 Adenocarcinoma Ovary 41   
+21 Adenocarcinoma Ovary 18   
+22 Adenocarcinoma Ovary  
+X Adenocarcinoma Ovary  

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Adenocarcinoma Ovary 28   
-2 Adenocarcinoma Ovary 46   
-3 Adenocarcinoma Ovary 30   
-4 Adenocarcinoma Ovary 69   
-5 Adenocarcinoma Ovary 61   
-6 Adenocarcinoma Ovary 71   
-7 Adenocarcinoma Ovary 51   
-8 Adenocarcinoma Ovary 89   
-9 Adenocarcinoma Ovary 60   
-10 Adenocarcinoma Ovary 63   
-11 Adenocarcinoma Ovary 57   
-12 Adenocarcinoma Ovary 44   
-13 Adenocarcinoma Ovary 90   
-14 Adenocarcinoma Ovary 99   
-15 Adenocarcinoma Ovary 109   
-16 Adenocarcinoma Ovary 70   
-17 Adenocarcinoma Ovary 95   
-18 Adenocarcinoma Ovary 79   
-19 Adenocarcinoma Ovary 75   
-20 Adenocarcinoma Ovary 60   
-21 Adenocarcinoma Ovary 76   
-22 Adenocarcinoma Ovary 101   
-X Adenocarcinoma Ovary 123