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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

Expand Gene List:




[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
11q21 inv(11)(q21q25) Adenocarcinoma Breast  
11q25 inv(11)(q21q25) Adenocarcinoma Breast  

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
11p11 add(11)(p11) Adenocarcinoma Breast  
11p11 del(11)(p11p13) Adenocarcinoma Breast  
11p12 add(11)(p12) Adenocarcinoma Breast  
11p12 del(11)(p12) Adenocarcinoma Breast  
11p13 add(11)(p13) Adenocarcinoma Breast  
11p13 del(11)(p11p13) Adenocarcinoma Breast  
11p13 del(11)(p13) Adenocarcinoma Breast  
11p14 add(11)(p14) Adenocarcinoma Breast  
11p15 add(11)(p15) Adenocarcinoma Breast 23   
11q10 der(7;11)(p10;q10) Adenocarcinoma Breast  
11q10 i(11)(q10) Adenocarcinoma Breast  
11q11 add(11)(q11) Adenocarcinoma Breast  
11q11 dup(11)(q11q25) Adenocarcinoma Breast  
11q12 del(11)(q12q14) Adenocarcinoma Breast  
11q13 add(11)(q13) Adenocarcinoma Breast  
11q13 del(11)(q13) Adenocarcinoma Breast  
11q13 hsr(11)(q13) Adenocarcinoma Breast  
11q14 add(11)(q14) Adenocarcinoma Breast  
11q14 del(11)(q12q14) Adenocarcinoma Breast  
11q14 del(11)(q14) Adenocarcinoma Breast INTS4/GAB2
11q21 add(11)(q21) Adenocarcinoma Breast  
11q22 del(11)(q22) Adenocarcinoma Breast  
11q23 add(11)(q23) Adenocarcinoma Breast  
11q23 del(11)(q23) Adenocarcinoma Breast 15   
11q23 dic(5;11)(p14;q23) Adenocarcinoma Breast  
11q25 add(11)(q25) Adenocarcinoma Breast  
11q25 dup(11)(q11q25) Adenocarcinoma Breast  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Adenocarcinoma Breast 71   
+2 Adenocarcinoma Breast 21   
+3 Adenocarcinoma Breast 34   
+4 Adenocarcinoma Breast 19   
+5 Adenocarcinoma Breast 34   
+6 Adenocarcinoma Breast 29   
+7 Adenocarcinoma Breast 89   
+8 Adenocarcinoma Breast 62   
+9 Adenocarcinoma Breast 36   
+10 Adenocarcinoma Breast 25   
+11 Adenocarcinoma Breast 24   
+12 Adenocarcinoma Breast 35   
+13 Adenocarcinoma Breast 18   
+14 Adenocarcinoma Breast 25   
+15 Adenocarcinoma Breast 23   
+16 Adenocarcinoma Breast 51   
+17 Adenocarcinoma Breast 21   
+18 Adenocarcinoma Breast 63   
+19 Adenocarcinoma Breast 30   
+20 Adenocarcinoma Breast 68   
+21 Adenocarcinoma Breast 33   
+22 Adenocarcinoma Breast 27   
+X Adenocarcinoma Breast 39   

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Adenocarcinoma Breast 16   
-2 Adenocarcinoma Breast 47   
-3 Adenocarcinoma Breast 37   
-4 Adenocarcinoma Breast 74   
-5 Adenocarcinoma Breast 49   
-6 Adenocarcinoma Breast 45   
-7 Adenocarcinoma Breast 39   
-8 Adenocarcinoma Breast 72   
-9 Adenocarcinoma Breast 53   
-10 Adenocarcinoma Breast 73   
-11 Adenocarcinoma Breast 57   
-12 Adenocarcinoma Breast 38   
-13 Adenocarcinoma Breast 105   
-14 Adenocarcinoma Breast 82   
-15 Adenocarcinoma Breast 79   
-16 Adenocarcinoma Breast 74   
-17 Adenocarcinoma Breast 95   
-18 Adenocarcinoma Breast 86   
-19 Adenocarcinoma Breast 87   
-20 Adenocarcinoma Breast 56   
-21 Adenocarcinoma Breast 76   
-22 Adenocarcinoma Breast 106   
-X Adenocarcinoma Breast 113   
-Y Adenocarcinoma Breast