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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

Expand Gene List:




[Full Text]

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
11p11 add(11)(p11) Adult T-cell lymphoma/leukemia (HTLV-1+)    
11p15 add(11)(p15) Adult T-cell lymphoma/leukemia (HTLV-1+)    
11q13 del(11)(q13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
11q13 dup(11)(q13q23) Adult T-cell lymphoma/leukemia (HTLV-1+)    
11q23 add(11)(q23) Adult T-cell lymphoma/leukemia (HTLV-1+)    
11q23 del(11)(q23) Adult T-cell lymphoma/leukemia (HTLV-1+)    
11q23 dup(11)(q13q23) Adult T-cell lymphoma/leukemia (HTLV-1+)    
11q25 add(11)(q25) Adult T-cell lymphoma/leukemia (HTLV-1+)    

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+2 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+3 Adult T-cell lymphoma/leukemia (HTLV-1+)   54   
+4 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+5 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+6 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+7 Adult T-cell lymphoma/leukemia (HTLV-1+)   26   
+8 Adult T-cell lymphoma/leukemia (HTLV-1+)   19   
+9 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+10 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+11 Adult T-cell lymphoma/leukemia (HTLV-1+)   11   
+12 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+13 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+14 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+15 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+16 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+17 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+18 Adult T-cell lymphoma/leukemia (HTLV-1+)   12   
+19 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+20 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+21 Adult T-cell lymphoma/leukemia (HTLV-1+)   24   
+22 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+X Adult T-cell lymphoma/leukemia (HTLV-1+)    

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Adult T-cell lymphoma/leukemia (HTLV-1+)    
-2 Adult T-cell lymphoma/leukemia (HTLV-1+)    
-3 Adult T-cell lymphoma/leukemia (HTLV-1+)    
-4 Adult T-cell lymphoma/leukemia (HTLV-1+)   24   
-5 Adult T-cell lymphoma/leukemia (HTLV-1+)   16   
-6 Adult T-cell lymphoma/leukemia (HTLV-1+)   15   
-7 Adult T-cell lymphoma/leukemia (HTLV-1+)    
-8 Adult T-cell lymphoma/leukemia (HTLV-1+)   11   
-9 Adult T-cell lymphoma/leukemia (HTLV-1+)   20   
-10 Adult T-cell lymphoma/leukemia (HTLV-1+)   24   
-11 Adult T-cell lymphoma/leukemia (HTLV-1+)    
-12 Adult T-cell lymphoma/leukemia (HTLV-1+)   20   
-13 Adult T-cell lymphoma/leukemia (HTLV-1+)   19   
-14 Adult T-cell lymphoma/leukemia (HTLV-1+)   25   
-15 Adult T-cell lymphoma/leukemia (HTLV-1+)   15   
-16 Adult T-cell lymphoma/leukemia (HTLV-1+)   20   
-17 Adult T-cell lymphoma/leukemia (HTLV-1+)   24   
-18 Adult T-cell lymphoma/leukemia (HTLV-1+)   15   
-19 Adult T-cell lymphoma/leukemia (HTLV-1+)   18   
-20 Adult T-cell lymphoma/leukemia (HTLV-1+)    
-21 Adult T-cell lymphoma/leukemia (HTLV-1+)   14   
-22 Adult T-cell lymphoma/leukemia (HTLV-1+)   20   
-X Adult T-cell lymphoma/leukemia (HTLV-1+)   33   
-Y Adult T-cell lymphoma/leukemia (HTLV-1+)   31