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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

Expand Gene List:




[Full Text]

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
11p11 der(11)t(10;11)(q11;p11) Mycosis fungoides/Sezary syndrome    
11p15 add(11)(p15) Mycosis fungoides/Sezary syndrome    
11q21 add(11)(q21) Mycosis fungoides/Sezary syndrome    
11q21 del(11)(q21) Mycosis fungoides/Sezary syndrome    
11q23 add(11)(q23) Mycosis fungoides/Sezary syndrome    
11q24 add(11)(q24) Mycosis fungoides/Sezary syndrome    

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Mycosis fungoides/Sezary syndrome    
+3 Mycosis fungoides/Sezary syndrome    
+4 Mycosis fungoides/Sezary syndrome    
+5 Mycosis fungoides/Sezary syndrome    
+6 Mycosis fungoides/Sezary syndrome    
+7 Mycosis fungoides/Sezary syndrome   12   
+8 Mycosis fungoides/Sezary syndrome   14   
+9 Mycosis fungoides/Sezary syndrome    
+11 Mycosis fungoides/Sezary syndrome    
+14 Mycosis fungoides/Sezary syndrome    
+15 Mycosis fungoides/Sezary syndrome    
+16 Mycosis fungoides/Sezary syndrome    
+17 Mycosis fungoides/Sezary syndrome    
+18 Mycosis fungoides/Sezary syndrome   15   
+19 Mycosis fungoides/Sezary syndrome    
+20 Mycosis fungoides/Sezary syndrome    
+21 Mycosis fungoides/Sezary syndrome    
+22 Mycosis fungoides/Sezary syndrome    
+X Mycosis fungoides/Sezary syndrome    
+Y Mycosis fungoides/Sezary syndrome    

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Mycosis fungoides/Sezary syndrome    
-2 Mycosis fungoides/Sezary syndrome   10   
-3 Mycosis fungoides/Sezary syndrome    
-4 Mycosis fungoides/Sezary syndrome    
-5 Mycosis fungoides/Sezary syndrome    
-6 Mycosis fungoides/Sezary syndrome   18   
-7 Mycosis fungoides/Sezary syndrome    
-8 Mycosis fungoides/Sezary syndrome   18   
-9 Mycosis fungoides/Sezary syndrome   28   
-10 Mycosis fungoides/Sezary syndrome   56   
-11 Mycosis fungoides/Sezary syndrome   17   
-12 Mycosis fungoides/Sezary syndrome   17   
-13 Mycosis fungoides/Sezary syndrome   22   
-14 Mycosis fungoides/Sezary syndrome   15   
-15 Mycosis fungoides/Sezary syndrome   21   
-16 Mycosis fungoides/Sezary syndrome    
-17 Mycosis fungoides/Sezary syndrome   20   
-18 Mycosis fungoides/Sezary syndrome   10   
-19 Mycosis fungoides/Sezary syndrome   11   
-20 Mycosis fungoides/Sezary syndrome    
-21 Mycosis fungoides/Sezary syndrome    
-22 Mycosis fungoides/Sezary syndrome   15   
-X Mycosis fungoides/Sezary syndrome   22   
-Y Mycosis fungoides/Sezary syndrome   13