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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

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[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
11q13 t(11;14)(q13;q32) Diffuse large B-cell lymphoma   11  IGH/CCND1
11q23 t(11;14)(q23;q32) Diffuse large B-cell lymphoma    
11q23 t(7;11)(p13;q23) Diffuse large B-cell lymphoma    

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
11p11 add(11)(p11) Diffuse large B-cell lymphoma    
11p12 add(11)(p12) Diffuse large B-cell lymphoma    
11p13 add(11)(p13) Diffuse large B-cell lymphoma    
11p13 del(11)(p13) Diffuse large B-cell lymphoma    
11p13 del(11)(p13p15) Diffuse large B-cell lymphoma    
11p14 add(11)(p14) Diffuse large B-cell lymphoma    
11p15 add(11)(p15) Diffuse large B-cell lymphoma    
11p15 del(11)(p13p15) Diffuse large B-cell lymphoma    
11q10 i(11)(q10) Diffuse large B-cell lymphoma    
11q13 add(11)(q13) Diffuse large B-cell lymphoma    
11q13 del(11)(q13) Diffuse large B-cell lymphoma    
11q13 del(11)(q13q21) Diffuse large B-cell lymphoma    
11q13 del(11)(q13q23) Diffuse large B-cell lymphoma    
11q13 der(1)t(1;11)(p36;q13) Diffuse large B-cell lymphoma    
11q13 der(14)t(11;14)(q13;q32) Diffuse large B-cell lymphoma    
11q13 der(16)t(11;16)(q13;p13) Diffuse large B-cell lymphoma    
11q13 der(19)t(11;19)(q13;p13) Diffuse large B-cell lymphoma    
11q13 dup(11)(q13q13) Diffuse large B-cell lymphoma    
11q13 dup(11)(q13q13) Diffuse large B-cell lymphoma    
11q13 dup(11)(q13q23) Diffuse large B-cell lymphoma    
11q13 dup(11)(q13q25) Diffuse large B-cell lymphoma    
11q13 dup(11)(q23q13) Diffuse large B-cell lymphoma    
11q14 add(11)(q14) Diffuse large B-cell lymphoma    
11q14 del(11)(q14) Diffuse large B-cell lymphoma    
11q21 del(11)(q13q21) Diffuse large B-cell lymphoma    
11q21 del(11)(q21) Diffuse large B-cell lymphoma    
11q21 del(11)(q21q23) Diffuse large B-cell lymphoma    
11q21 dup(11)(q21q24) Diffuse large B-cell lymphoma    
11q22 add(11)(q22) Diffuse large B-cell lymphoma    
11q22 del(11)(q22) Diffuse large B-cell lymphoma    
11q23 add(11)(q23) Diffuse large B-cell lymphoma   22   
11q23 del(11)(q13q23) Diffuse large B-cell lymphoma    
11q23 del(11)(q21q23) Diffuse large B-cell lymphoma    
11q23 del(11)(q23) Diffuse large B-cell lymphoma   11   
11q23 dup(11)(q13q23) Diffuse large B-cell lymphoma    
11q23 dup(11)(q23q13) Diffuse large B-cell lymphoma    
11q24 dup(11)(q21q24) Diffuse large B-cell lymphoma    
11q25 add(11)(q25) Diffuse large B-cell lymphoma    
11q25 dup(11)(q13q25) Diffuse large B-cell lymphoma    

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Diffuse large B-cell lymphoma   26   
+2 Diffuse large B-cell lymphoma   48   
+3 Diffuse large B-cell lymphoma   146   
+4 Diffuse large B-cell lymphoma   19   
+5 Diffuse large B-cell lymphoma   99   
+6 Diffuse large B-cell lymphoma   41   
+7 Diffuse large B-cell lymphoma   237   
+7 Diffuse large B-cell lymphoma Testis  
+8 Diffuse large B-cell lymphoma Testis  
+8 Diffuse large B-cell lymphoma   65   
+9 Diffuse large B-cell lymphoma   73   
+10 Diffuse large B-cell lymphoma   37   
+10 Diffuse large B-cell lymphoma Testis  
+11 Diffuse large B-cell lymphoma   90   
+12 Diffuse large B-cell lymphoma   207   
+12 Diffuse large B-cell lymphoma Testis  
+13 Diffuse large B-cell lymphoma   60   
+14 Diffuse large B-cell lymphoma   36   
+15 Diffuse large B-cell lymphoma   32   
+16 Diffuse large B-cell lymphoma   64   
+17 Diffuse large B-cell lymphoma   33   
+18 Diffuse large B-cell lymphoma   200   
+18 Diffuse large B-cell lymphoma Brain  
+19 Diffuse large B-cell lymphoma   64   
+20 Diffuse large B-cell lymphoma   97   
+20 Diffuse large B-cell lymphoma Testis  
+21 Diffuse large B-cell lymphoma   129   
+21 Diffuse large B-cell lymphoma Testis  
+22 Diffuse large B-cell lymphoma   50   
+X Diffuse large B-cell lymphoma   181   
+X Diffuse large B-cell lymphoma Testis  
+Y Diffuse large B-cell lymphoma Testis  
+Y Diffuse large B-cell lymphoma   30   

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Diffuse large B-cell lymphoma   79   
-2 Diffuse large B-cell lymphoma   98   
-3 Diffuse large B-cell lymphoma   57   
-4 Diffuse large B-cell lymphoma   123   
-5 Diffuse large B-cell lymphoma   49   
-6 Diffuse large B-cell lymphoma   95   
-7 Diffuse large B-cell lymphoma   51   
-8 Diffuse large B-cell lymphoma Testis  
-8 Diffuse large B-cell lymphoma   101   
-9 Diffuse large B-cell lymphoma Brain  
-9 Diffuse large B-cell lymphoma Testis  
-9 Diffuse large B-cell lymphoma   91   
-10 Diffuse large B-cell lymphoma   91   
-10 Diffuse large B-cell lymphoma Testis  
-11 Diffuse large B-cell lymphoma Testis  
-11 Diffuse large B-cell lymphoma   46   
-12 Diffuse large B-cell lymphoma   43   
-12 Diffuse large B-cell lymphoma Testis  
-13 Diffuse large B-cell lymphoma Testis  
-13 Diffuse large B-cell lymphoma   127   
-14 Diffuse large B-cell lymphoma   82   
-14 Diffuse large B-cell lymphoma Testis  
-15 Diffuse large B-cell lymphoma   148   
-15 Diffuse large B-cell lymphoma Testis  
-16 Diffuse large B-cell lymphoma   95   
-16 Diffuse large B-cell lymphoma Testis  
-17 Diffuse large B-cell lymphoma   125   
-17 Diffuse large B-cell lymphoma Testis  
-18 Diffuse large B-cell lymphoma   80   
-19 Diffuse large B-cell lymphoma Testis  
-19 Diffuse large B-cell lymphoma   66   
-20 Diffuse large B-cell lymphoma Testis  
-20 Diffuse large B-cell lymphoma   45   
-21 Diffuse large B-cell lymphoma   67   
-22 Diffuse large B-cell lymphoma Testis  
-22 Diffuse large B-cell lymphoma   85   
-X Diffuse large B-cell lymphoma   136   
-Y Diffuse large B-cell lymphoma   166   
-Y Diffuse large B-cell lymphoma Testis