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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

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[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
11q11 t(11;14)(q11;q32) Chronic lymphocytic leukemia    
11q13 t(11;14)(q13;q32) Chronic lymphocytic leukemia   85  IGH/CCND1,IGH+
11q14 t(11;14)(q14;q32) Chronic lymphocytic leukemia    
11q21 t(11;18)(q21;q21) Chronic lymphocytic leukemia    

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
11p11 der(17)t(11;17)(p11;p11) Chronic lymphocytic leukemia    
11p13 del(11)(p13) Chronic lymphocytic leukemia    
11p14 add(11)(p14) Chronic lymphocytic leukemia    
11p15 add(11)(p15) Chronic lymphocytic leukemia    
11q11 add(11)(q11) Chronic lymphocytic leukemia    
11q11 del(11)(q11) Chronic lymphocytic leukemia    
11q11 del(11)(q11q23) Chronic lymphocytic leukemia    
11q13 add(11)(q13) Chronic lymphocytic leukemia    
11q13 del(11)(q13) Chronic lymphocytic leukemia   13   
11q13 del(11)(q13q21) Chronic lymphocytic leukemia    
11q13 del(11)(q13q22) Chronic lymphocytic leukemia    
11q13 del(11)(q13q23) Chronic lymphocytic leukemia   18   
11q13 del(11)(q13q24) Chronic lymphocytic leukemia    
11q13 der(14)t(11;14)(q13;q32) Chronic lymphocytic leukemia    
11q14 del(11)(q14) Chronic lymphocytic leukemia    
11q14 del(11)(q14q23) Chronic lymphocytic leukemia   20   
11q14 del(11)(q14q24) Chronic lymphocytic leukemia    
11q14 del(11)(q14q25) Chronic lymphocytic leukemia    
11q21 add(11)(q21) Chronic lymphocytic leukemia    
11q21 del(11)(q13q21) Chronic lymphocytic leukemia    
11q21 del(11)(q21) Chronic lymphocytic leukemia   21   
11q21 del(11)(q21q23) Chronic lymphocytic leukemia   13   
11q21 del(11)(q21q24) Chronic lymphocytic leukemia    
11q21 del(11)(q21q25) Chronic lymphocytic leukemia    
11q21 der(11)t(4;11)(q12;q21) Chronic lymphocytic leukemia    
11q22 del(11)(q13q22) Chronic lymphocytic leukemia    
11q22 del(11)(q22) Chronic lymphocytic leukemia   26   
11q22 del(11)(q22q23) Chronic lymphocytic leukemia   21   
11q22 del(11)(q22q24) Chronic lymphocytic leukemia    
11q23 add(11)(q23) Chronic lymphocytic leukemia    
11q23 del(11)(q11q23) Chronic lymphocytic leukemia    
11q23 del(11)(q13q23) Chronic lymphocytic leukemia   18   
11q23 del(11)(q14q23) Chronic lymphocytic leukemia   20   
11q23 del(11)(q21q23) Chronic lymphocytic leukemia   13   
11q23 del(11)(q22q23) Chronic lymphocytic leukemia   21   
11q23 del(11)(q23) Chronic lymphocytic leukemia   16   
11q23 del(11)(q23q25) Chronic lymphocytic leukemia    
11q23 der(11)t(11;17)(q23;q21) Chronic lymphocytic leukemia    
11q23 der(4)t(4;11)(q12;q23) Chronic lymphocytic leukemia    
11q24 del(11)(q13q24) Chronic lymphocytic leukemia    
11q24 del(11)(q14q24) Chronic lymphocytic leukemia    
11q24 del(11)(q21q24) Chronic lymphocytic leukemia    
11q24 del(11)(q22q24) Chronic lymphocytic leukemia    
11q24 del(11)(q24) Chronic lymphocytic leukemia    
11q25 add(11)(q25) Chronic lymphocytic leukemia    
11q25 del(11)(q14q25) Chronic lymphocytic leukemia    
11q25 del(11)(q21q25) Chronic lymphocytic leukemia    
11q25 del(11)(q23q25) Chronic lymphocytic leukemia    

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Chronic lymphocytic leukemia   13   
+2 Chronic lymphocytic leukemia    
+3 Chronic lymphocytic leukemia   50   
+4 Chronic lymphocytic leukemia   11   
+5 Chronic lymphocytic leukemia   13   
+6 Chronic lymphocytic leukemia   13   
+7 Chronic lymphocytic leukemia   23   
+8 Chronic lymphocytic leukemia   38   
+9 Chronic lymphocytic leukemia   16   
+10 Chronic lymphocytic leukemia    
+11 Chronic lymphocytic leukemia    
+12 Chronic lymphocytic leukemia   785   
+13 Chronic lymphocytic leukemia   10   
+14 Chronic lymphocytic leukemia    
+15 Chronic lymphocytic leukemia   17   
+16 Chronic lymphocytic leukemia   11   
+17 Chronic lymphocytic leukemia   12   
+18 Chronic lymphocytic leukemia   89   
+19 Chronic lymphocytic leukemia   68   
+20 Chronic lymphocytic leukemia   15   
+21 Chronic lymphocytic leukemia   39   
+22 Chronic lymphocytic leukemia   20   
+X Chronic lymphocytic leukemia   33   
+Y Chronic lymphocytic leukemia   13   

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Chronic lymphocytic leukemia   20   
-2 Chronic lymphocytic leukemia   26   
-3 Chronic lymphocytic leukemia   27   
-4 Chronic lymphocytic leukemia   26   
-5 Chronic lymphocytic leukemia   26   
-6 Chronic lymphocytic leukemia   39   
-7 Chronic lymphocytic leukemia   26   
-8 Chronic lymphocytic leukemia   67   
-9 Chronic lymphocytic leukemia   51   
-10 Chronic lymphocytic leukemia   37   
-11 Chronic lymphocytic leukemia   38   
-12 Chronic lymphocytic leukemia   24   
-13 Chronic lymphocytic leukemia   75   
-14 Chronic lymphocytic leukemia   47   
-15 Chronic lymphocytic leukemia   42   
-16 Chronic lymphocytic leukemia   23   
-17 Chronic lymphocytic leukemia   105   
-18 Chronic lymphocytic leukemia   57   
-19 Chronic lymphocytic leukemia   13   
-20 Chronic lymphocytic leukemia   46   
-21 Chronic lymphocytic leukemia   48   
-22 Chronic lymphocytic leukemia   37   
-X Chronic lymphocytic leukemia   99   
-Y Chronic lymphocytic leukemia   130