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  • SNP500Cancer
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

Expand Gene List:




[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
11q23 t(2;11)(p21;q23) Refractory cytopenia with multilineage dysplasia    

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
11q23 del(11)(q23) Refractory cytopenia with multilineage dysplasia    

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Refractory cytopenia with multilineage dysplasia    
+2 Refractory cytopenia with multilineage dysplasia    
+3 Refractory cytopenia with multilineage dysplasia    
+6 Refractory cytopenia with multilineage dysplasia    
+8 Refractory cytopenia with multilineage dysplasia   28   
+9 Refractory cytopenia with multilineage dysplasia    
+11 Refractory cytopenia with multilineage dysplasia    
+13 Refractory cytopenia with multilineage dysplasia    
+15 Refractory cytopenia with multilineage dysplasia    
+19 Refractory cytopenia with multilineage dysplasia    
+21 Refractory cytopenia with multilineage dysplasia    
+22 Refractory cytopenia with multilineage dysplasia    

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-3 Refractory cytopenia with multilineage dysplasia    
-5 Refractory cytopenia with multilineage dysplasia   12   
-6 Refractory cytopenia with multilineage dysplasia    
-7 Refractory cytopenia with multilineage dysplasia   30   
-12 Refractory cytopenia with multilineage dysplasia    
-13 Refractory cytopenia with multilineage dysplasia    
-14 Refractory cytopenia with multilineage dysplasia    
-15 Refractory cytopenia with multilineage dysplasia    
-16 Refractory cytopenia with multilineage dysplasia    
-17 Refractory cytopenia with multilineage dysplasia    
-18 Refractory cytopenia with multilineage dysplasia    
-20 Refractory cytopenia with multilineage dysplasia   12   
-21 Refractory cytopenia with multilineage dysplasia    
-22 Refractory cytopenia with multilineage dysplasia    
-X Refractory cytopenia with multilineage dysplasia    
-Y Refractory cytopenia with multilineage dysplasia