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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

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[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
7p15 t(7;17)(p15;q11) Endometrial stromal sarcoma Uterus, corpus JAZF1/SUZ12
7p15 t(7;17)(p15;q21) Endometrial stromal sarcoma Uterus, corpus  
10q22 t(10;17)(q22;p13) Endometrial stromal sarcoma Uterus, corpus 16  YWHAE/NUTM2B
10q22 t(10;17;12)(q22;p11;q13) Endometrial stromal sarcoma Uterus, corpus  
12q13 t(10;17;12)(q22;p11;q13) Endometrial stromal sarcoma Uterus, corpus  
17p11 t(10;17;12)(q22;p11;q13) Endometrial stromal sarcoma Uterus, corpus  
17p13 t(10;17)(q22;p13) Endometrial stromal sarcoma Uterus, corpus 16  YWHAE/NUTM2B
17q11 t(7;17)(p15;q11) Endometrial stromal sarcoma Uterus, corpus JAZF1/SUZ12
17q21 t(7;17)(p15;q21) Endometrial stromal sarcoma Uterus, corpus  

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1q10 i(1)(q10) Endometrial stromal sarcoma Uterus, corpus  
1q11 del(1)(q11) Endometrial stromal sarcoma Uterus, corpus  
5q35 der(5)t(5;21)(q35;q11) Endometrial stromal sarcoma Uterus, corpus  
6q15 del(6)(q15) Endometrial stromal sarcoma Uterus, corpus  
6q21 del(6)(q21) Endometrial stromal sarcoma Uterus, corpus  
7p21 add(7)(p21) Endometrial stromal sarcoma Uterus, corpus  
9p11 der(9)del(9)(p11)del(9)(q12) Endometrial stromal sarcoma Uterus, corpus  
9q10 der(9;11)(q10;q10) Endometrial stromal sarcoma Uterus, corpus  
9q12 der(9)del(9)(p11)del(9)(q12) Endometrial stromal sarcoma Uterus, corpus  
9q34 add(9)(q34) Endometrial stromal sarcoma Uterus, corpus  
10q22 del(10)(q22) Endometrial stromal sarcoma Uterus, corpus  
10q22 der(17)t(10;17)(q22;p13) Endometrial stromal sarcoma Uterus, corpus  
11q10 der(9;11)(q10;q10) Endometrial stromal sarcoma Uterus, corpus  
16q22 del(16)(q22) Endometrial stromal sarcoma Uterus, corpus  
17p13 der(17)t(10;17)(q22;p13) Endometrial stromal sarcoma Uterus, corpus  
19p13 add(19)(p13) Endometrial stromal sarcoma Uterus, corpus  
19q13 add(19)(q13) Endometrial stromal sarcoma Uterus, corpus  
20p13 add(20)(p13) Endometrial stromal sarcoma Uterus, corpus  
21q11 der(5)t(5;21)(q35;q11) Endometrial stromal sarcoma Uterus, corpus  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+2 Endometrial stromal sarcoma Uterus, corpus  
+3 Endometrial stromal sarcoma Uterus, corpus  
+4 Endometrial stromal sarcoma Uterus, corpus  
+7 Endometrial stromal sarcoma Uterus, corpus  
+8 Endometrial stromal sarcoma Uterus, corpus  
+9 Endometrial stromal sarcoma Uterus, corpus  
+11 Endometrial stromal sarcoma Uterus, corpus  
+13 Endometrial stromal sarcoma Uterus, corpus  
+19 Endometrial stromal sarcoma Uterus, corpus  
+20 Endometrial stromal sarcoma Uterus, corpus  
+21 Endometrial stromal sarcoma Uterus, corpus  
+22 Endometrial stromal sarcoma Uterus, corpus  

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-3 Endometrial stromal sarcoma Uterus, corpus  
-5 Endometrial stromal sarcoma Uterus, corpus  
-6 Endometrial stromal sarcoma Uterus, corpus  
-7 Endometrial stromal sarcoma Uterus, corpus  
-8 Endometrial stromal sarcoma Uterus, corpus  
-9 Endometrial stromal sarcoma Uterus, corpus  
-10 Endometrial stromal sarcoma Uterus, corpus  
-11 Endometrial stromal sarcoma Uterus, corpus  
-13 Endometrial stromal sarcoma Uterus, corpus  
-14 Endometrial stromal sarcoma Uterus, corpus  
-15 Endometrial stromal sarcoma Uterus, corpus  
-16 Endometrial stromal sarcoma Uterus, corpus  
-19 Endometrial stromal sarcoma Uterus, corpus  
-20 Endometrial stromal sarcoma Uterus, corpus  
-21 Endometrial stromal sarcoma Uterus, corpus  
-22 Endometrial stromal sarcoma Uterus, corpus  
-X Endometrial stromal sarcoma Uterus, corpus