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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

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[Full Text]

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p10 i(1)(p10) Osteosarcoma, NOS Skeleton  
1p11 add(1)(p11) Osteosarcoma, NOS Skeleton  
1p11 del(1)(p11) Osteosarcoma, NOS Skeleton  
1p13 del(1)(p13) Osteosarcoma, NOS Skeleton  
1p32 add(1)(p32) Osteosarcoma, NOS Skeleton  
1p36 add(1)(p36) Osteosarcoma, NOS Skeleton  
1p36 der(1)t(1;3)(p36;p21) Osteosarcoma, NOS Skeleton  
1q10 del(1)(q10) Osteosarcoma, NOS Skeleton  
1q10 i(1)(q10) Osteosarcoma, NOS Skeleton  
1q11 del(1)(q11) Osteosarcoma, NOS Skeleton 10   
1q12 add(1)(q12) Osteosarcoma, NOS Skeleton  
1q12 del(1)(q12) Osteosarcoma, NOS Skeleton  
1q21 add(1)(q21) Osteosarcoma, NOS Skeleton  
1q21 del(1)(q21) Osteosarcoma, NOS Skeleton  
1q22 del(1)(q22) Osteosarcoma, NOS Skeleton  
1q32 del(1)(q32) Osteosarcoma, NOS Skeleton  
1q42 del(1)(q42) Osteosarcoma, NOS Skeleton  
1q44 add(1)(q44) Osteosarcoma, NOS Skeleton  
2p11 del(2)(p11) Osteosarcoma, NOS Skeleton  
2p11 der(2)t(2;8)(p11;q13) Osteosarcoma, NOS Skeleton  
2p25 add(2)(p25) Osteosarcoma, NOS Skeleton  
2q32 add(2)(q32) Osteosarcoma, NOS Skeleton  
3p11 add(3)(p11) Osteosarcoma, NOS Skeleton  
3p11 del(3)(p11) Osteosarcoma, NOS Skeleton  
3p12 add(3)(p12) Osteosarcoma, NOS Skeleton  
3p13 add(3)(p13) Osteosarcoma, NOS Skeleton  
3p21 add(3)(p21) Osteosarcoma, NOS Skeleton  
3p21 der(1)t(1;3)(p36;p21) Osteosarcoma, NOS Skeleton  
3p26 add(3)(p26) Osteosarcoma, NOS Skeleton  
3q10 i(3)(q10) Osteosarcoma, NOS Skeleton  
3q11 add(3)(q11) Osteosarcoma, NOS Skeleton  
3q12 del(3)(q12) Osteosarcoma, NOS Skeleton  
3q27 add(3)(q27) Osteosarcoma, NOS Skeleton  
3q29 add(3)(q29) Osteosarcoma, NOS Skeleton  
4p11 add(4)(p11) Osteosarcoma, NOS Skeleton  
4p15 del(4)(p15) Osteosarcoma, NOS Skeleton  
4p16 add(4)(p16) Osteosarcoma, NOS Skeleton  
4q28 add(4)(q28) Osteosarcoma, NOS Skeleton  
4q31 del(4)(q31) Osteosarcoma, NOS Skeleton  
4q35 add(4)(q35) Osteosarcoma, NOS Skeleton  
5p11 der(5)t(5;13)(p11;q14) Osteosarcoma, NOS Skeleton  
5p12 add(5)(p12) Osteosarcoma, NOS Skeleton  
5p13 add(5)(p13) Osteosarcoma, NOS Skeleton  
5p14 add(5)(p14) Osteosarcoma, NOS Skeleton  
5q11 del(5)(q11) Osteosarcoma, NOS Skeleton  
6p10 i(6)(p10) Osteosarcoma, NOS Skeleton  
6p11 del(6)(p11) Osteosarcoma, NOS Skeleton  
6p23 add(6)(p23) Osteosarcoma, NOS Skeleton  
6p25 add(6)(p25) Osteosarcoma, NOS Skeleton  
6q11 del(6)(q11) Osteosarcoma, NOS Skeleton  
6q12 add(6)(q12) Osteosarcoma, NOS Skeleton  
6q13 del(6)(q13) Osteosarcoma, NOS Skeleton  
6q16 del(6)(q16) Osteosarcoma, NOS Skeleton  
6q21 del(6)(q21) Osteosarcoma, NOS Skeleton  
6q22 del(6)(q22) Osteosarcoma, NOS Skeleton  
6q23 del(6)(q23) Osteosarcoma, NOS Skeleton  
6q27 add(6)(q27) Osteosarcoma, NOS Skeleton  
7p13 add(7)(p13) Osteosarcoma, NOS Skeleton  
7p15 del(7)(p15) Osteosarcoma, NOS Skeleton  
7p22 add(7)(p22) Osteosarcoma, NOS Skeleton  
7q11 del(7)(q11) Osteosarcoma, NOS Skeleton  
7q22 add(7)(q22) Osteosarcoma, NOS Skeleton  
7q22 del(7)(q22) Osteosarcoma, NOS Skeleton  
7q36 add(7)(q36) Osteosarcoma, NOS Skeleton  
8p10 i(8)(p10) Osteosarcoma, NOS Skeleton  
8p12 add(8)(p12) Osteosarcoma, NOS Skeleton  
8p21 add(8)(p21) Osteosarcoma, NOS Skeleton  
8q13 der(2)t(2;8)(p11;q13) Osteosarcoma, NOS Skeleton  
8q24 add(8)(q24) Osteosarcoma, NOS Skeleton  
9p11 add(9)(p11) Osteosarcoma, NOS Skeleton  
9p13 add(9)(p13) Osteosarcoma, NOS Skeleton  
9p24 add(9)(p24) Osteosarcoma, NOS Skeleton  
9q10 i(9)(q10) Osteosarcoma, NOS Skeleton  
9q11 del(9)(q11) Osteosarcoma, NOS Skeleton  
9q34 add(9)(q34) Osteosarcoma, NOS Skeleton  
10p11 del(10)(p11) Osteosarcoma, NOS Skeleton  
10p13 del(10)(p13) Osteosarcoma, NOS Skeleton  
10q11 del(10)(q11) Osteosarcoma, NOS Skeleton  
10q22 add(10)(q22) Osteosarcoma, NOS Skeleton  
11p11 del(11)(p11) Osteosarcoma, NOS Skeleton  
11p12 add(11)(p12) Osteosarcoma, NOS Skeleton  
11p13 add(11)(p13) Osteosarcoma, NOS Skeleton  
11p15 add(11)(p15) Osteosarcoma, NOS Skeleton 13   
11p15 del(11)(p15) Osteosarcoma, NOS Skeleton  
12p10 i(12)(p10) Osteosarcoma, NOS Skeleton  
12p11 add(12)(p11) Osteosarcoma, NOS Skeleton  
12p12 add(12)(p12) Osteosarcoma, NOS Skeleton  
12p13 add(12)(p13) Osteosarcoma, NOS Skeleton  
12q22 del(12)(q22) Osteosarcoma, NOS Skeleton  
12q24 add(12)(q24) Osteosarcoma, NOS Skeleton  
13p11 add(13)(p11) Osteosarcoma, NOS Skeleton  
13q14 del(13)(q14) Osteosarcoma, NOS Skeleton  
13q14 der(5)t(5;13)(p11;q14) Osteosarcoma, NOS Skeleton  
13q34 add(13)(q34) Osteosarcoma, NOS Skeleton  
14p11 add(14)(p11) Osteosarcoma, NOS Skeleton  
14q10 i(14)(q10) Osteosarcoma, NOS Skeleton  
14q32 add(14)(q32) Osteosarcoma, NOS Skeleton  
15p11 add(15)(p11) Osteosarcoma, NOS Skeleton 10   
15p13 add(15)(p13) Osteosarcoma, NOS Skeleton  
16p11 add(16)(p11) Osteosarcoma, NOS Skeleton  

Band Abnormality Morphology Topography Cases Genes
16q11 del(16)(q11) Osteosarcoma, NOS Skeleton  
17p11 add(17)(p11) Osteosarcoma, NOS Skeleton  
17p11 del(17)(p11) Osteosarcoma, NOS Skeleton  
17p12 add(17)(p12) Osteosarcoma, NOS Skeleton  
17p12 del(17)(p12) Osteosarcoma, NOS Skeleton  
17p13 add(17)(p13) Osteosarcoma, NOS Skeleton  
17q25 add(17)(q25) Osteosarcoma, NOS Skeleton  
18p11 add(18)(p11) Osteosarcoma, NOS Skeleton  
18p11 del(18)(p11) Osteosarcoma, NOS Skeleton  
18q23 add(18)(q23) Osteosarcoma, NOS Skeleton  
19p13 add(19)(p13) Osteosarcoma, NOS Skeleton  
19p13 der(19)add(19)(p13)add(19)(q13) Osteosarcoma, NOS Skeleton  
19q13 add(19)(q13) Osteosarcoma, NOS Skeleton 14   
19q13 del(19)(q13) Osteosarcoma, NOS Skeleton  
19q13 der(19)add(19)(p13)add(19)(q13) Osteosarcoma, NOS Skeleton  
20p11 add(20)(p11) Osteosarcoma, NOS Skeleton  
20p11 der(21)t(20;21)(p11;p11) Osteosarcoma, NOS Skeleton  
20p13 add(20)(p13) Osteosarcoma, NOS Skeleton  
20q13 add(20)(q13) Osteosarcoma, NOS Skeleton  
21p11 add(21)(p11) Osteosarcoma, NOS Skeleton  
21p11 der(21)t(20;21)(p11;p11) Osteosarcoma, NOS Skeleton  
21q10 i(21)(q10) Osteosarcoma, NOS Skeleton  
21q22 add(21)(q22) Osteosarcoma, NOS Skeleton  
22p11 add(22)(p11) Osteosarcoma, NOS Skeleton  
22p12 add(22)(p12) Osteosarcoma, NOS Skeleton  
22q12 add(22)(q12) Osteosarcoma, NOS Skeleton  
22q13 add(22)(q13) Osteosarcoma, NOS Skeleton  
22q13 del(22)(q13) Osteosarcoma, NOS Skeleton  
Xp11 add(X)(p11) Osteosarcoma, NOS Skeleton  
Xp22 add(X)(p22) Osteosarcoma, NOS Skeleton  
Xq11 del(X)(q11) Osteosarcoma, NOS Skeleton  
Xq22 del(X)(q22) Osteosarcoma, NOS Skeleton  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Osteosarcoma, NOS Skeleton  
+2 Osteosarcoma, NOS Skeleton 11   
+3 Osteosarcoma, NOS Skeleton  
+4 Osteosarcoma, NOS Skeleton  
+5 Osteosarcoma, NOS Skeleton  
+6 Osteosarcoma, NOS Skeleton 10   
+7 Osteosarcoma, NOS Skeleton 15   
+8 Osteosarcoma, NOS Skeleton 10   
+9 Osteosarcoma, NOS Skeleton  
+11 Osteosarcoma, NOS Skeleton  
+12 Osteosarcoma, NOS Skeleton  
+13 Osteosarcoma, NOS Skeleton  
+14 Osteosarcoma, NOS Skeleton  
+15 Osteosarcoma, NOS Skeleton  
+16 Osteosarcoma, NOS Skeleton  
+17 Osteosarcoma, NOS Skeleton  
+18 Osteosarcoma, NOS Skeleton  
+19 Osteosarcoma, NOS Skeleton  
+20 Osteosarcoma, NOS Skeleton 15   
+21 Osteosarcoma, NOS Skeleton 15   
+22 Osteosarcoma, NOS Skeleton  
+X Osteosarcoma, NOS Skeleton  
+Y Osteosarcoma, NOS Skeleton  

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Osteosarcoma, NOS Skeleton 12   
-2 Osteosarcoma, NOS Skeleton 20   
-3 Osteosarcoma, NOS Skeleton 30   
-4 Osteosarcoma, NOS Skeleton 32   
-5 Osteosarcoma, NOS Skeleton 31   
-5 Osteosarcoma, NOS Soft tissue  
-6 Osteosarcoma, NOS Skeleton 24   
-6 Osteosarcoma, NOS Unknown site  
-6 Osteosarcoma, NOS Soft tissue  
-7 Osteosarcoma, NOS Skeleton 17   
-8 Osteosarcoma, NOS Skeleton 30   
-9 Osteosarcoma, NOS Skeleton 42   
-10 Osteosarcoma, NOS Unknown site  
-10 Osteosarcoma, NOS Skeleton 45   
-11 Osteosarcoma, NOS Skeleton 17   
-12 Osteosarcoma, NOS Skeleton 23   
-13 Osteosarcoma, NOS Unknown site  
-13 Osteosarcoma, NOS Skeleton 51   
-14 Osteosarcoma, NOS Skeleton 28   
-14 Osteosarcoma, NOS Soft tissue  
-15 Osteosarcoma, NOS Skeleton 38   
-16 Osteosarcoma, NOS Unknown site  
-16 Osteosarcoma, NOS Soft tissue  
-16 Osteosarcoma, NOS Skeleton 28   
-17 Osteosarcoma, NOS Skeleton 42   
-18 Osteosarcoma, NOS Skeleton 33   
-19 Osteosarcoma, NOS Skeleton 35   
-19 Osteosarcoma, NOS Soft tissue  
-20 Osteosarcoma, NOS Soft tissue  
-20 Osteosarcoma, NOS Skeleton 25   
-21 Osteosarcoma, NOS Skeleton 24   
-21 Osteosarcoma, NOS Soft tissue  
-22 Osteosarcoma, NOS Skeleton 37   
-X Osteosarcoma, NOS Skeleton 27   
-Y Osteosarcoma, NOS Soft tissue  
-Y Osteosarcoma, NOS Skeleton 13