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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

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[Full Text]

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p11 add(1)(p11) Chondrosarcoma, NOS Skeleton  
1q10 der(1;9)(q10;q10) Chondrosarcoma, NOS Skeleton  
1q10 i(1)(q10) Chondrosarcoma, NOS Skeleton  
1q21 der(19)t(1;19)(q21;p13) Chondrosarcoma, NOS Skeleton  
3q21 del(3)(q21) Chondrosarcoma, NOS Skeleton  
3q29 add(3)(q29) Chondrosarcoma, NOS Skeleton  
4q35 add(4)(q35) Chondrosarcoma, NOS Skeleton  
5q13 del(5)(q13) Chondrosarcoma, NOS Skeleton  
6p10 i(6)(p10) Chondrosarcoma, NOS Skeleton  
7p22 add(7)(p22) Chondrosarcoma, NOS Skeleton  
7q22 del(7)(q22) Chondrosarcoma, NOS Skeleton  
9p12 add(9)(p12) Chondrosarcoma, NOS Skeleton  
9p13 add(9)(p13) Chondrosarcoma, NOS Skeleton  
9p13 del(9)(p13) Chondrosarcoma, NOS Skeleton  
9q10 der(1;9)(q10;q10) Chondrosarcoma, NOS Skeleton  
9q10 i(9)(q10) Chondrosarcoma, NOS Skeleton  
9q12 del(9)(q12) Chondrosarcoma, NOS Skeleton  
11p11 add(11)(p11) Chondrosarcoma, NOS Skeleton  
11p15 add(11)(p15) Chondrosarcoma, NOS Skeleton  
11q23 del(11)(q23) Chondrosarcoma, NOS Skeleton  
13p11 add(13)(p11) Chondrosarcoma, NOS Skeleton  
13q34 add(13)(q34) Chondrosarcoma, NOS Skeleton  
14q32 add(14)(q32) Chondrosarcoma, NOS Skeleton  
15p11 add(15)(p11) Chondrosarcoma, NOS Skeleton  
16q21 add(16)(q21) Chondrosarcoma, NOS Skeleton  
16q24 add(16)(q24) Chondrosarcoma, NOS Skeleton  
17p11 add(17)(p11) Chondrosarcoma, NOS Skeleton  
17q10 i(17)(q10) Chondrosarcoma, NOS Skeleton  
17q25 add(17)(q25) Chondrosarcoma, NOS Skeleton  
18q21 add(18)(q21) Chondrosarcoma, NOS Skeleton  
19p13 add(19)(p13) Chondrosarcoma, NOS Skeleton  
19p13 der(19)t(1;19)(q21;p13) Chondrosarcoma, NOS Skeleton  
19q13 add(19)(q13) Chondrosarcoma, NOS Skeleton  
20q11 del(20)(q11) Chondrosarcoma, NOS Skeleton  
21p11 add(21)(p11) Chondrosarcoma, NOS Skeleton  
22p11 add(22)(p11) Chondrosarcoma, NOS Skeleton  
22q13 add(22)(q13) Chondrosarcoma, NOS Skeleton  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Chondrosarcoma, NOS Skeleton  
+2 Chondrosarcoma, NOS Skeleton 18   
+3 Chondrosarcoma, NOS Skeleton  
+4 Chondrosarcoma, NOS Skeleton  
+5 Chondrosarcoma, NOS Skeleton 17   
+6 Chondrosarcoma, NOS Skeleton  
+7 Chondrosarcoma, NOS Skeleton 33   
+8 Chondrosarcoma, NOS Skeleton 14   
+9 Chondrosarcoma, NOS Skeleton  
+11 Chondrosarcoma, NOS Skeleton  
+12 Chondrosarcoma, NOS Skeleton 19   
+13 Chondrosarcoma, NOS Skeleton  
+14 Chondrosarcoma, NOS Skeleton  
+15 Chondrosarcoma, NOS Skeleton 13   
+16 Chondrosarcoma, NOS Skeleton  
+17 Chondrosarcoma, NOS Skeleton  
+18 Chondrosarcoma, NOS Skeleton 13   
+19 Chondrosarcoma, NOS Skeleton 22   
+20 Chondrosarcoma, NOS Skeleton 22   
+21 Chondrosarcoma, NOS Skeleton 25   
+22 Chondrosarcoma, NOS Skeleton 13   
+X Chondrosarcoma, NOS Skeleton  
+Y Chondrosarcoma, NOS Skeleton  

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Chondrosarcoma, NOS Skeleton 18   
-2 Chondrosarcoma, NOS Skeleton  
-3 Chondrosarcoma, NOS Skeleton 14   
-4 Chondrosarcoma, NOS Skeleton 22   
-5 Chondrosarcoma, NOS Skeleton 14   
-6 Chondrosarcoma, NOS Skeleton 31   
-7 Chondrosarcoma, NOS Skeleton  
-8 Chondrosarcoma, NOS Skeleton 11   
-9 Chondrosarcoma, NOS Skeleton 19   
-10 Chondrosarcoma, NOS Skeleton 32   
-11 Chondrosarcoma, NOS Skeleton 20   
-12 Chondrosarcoma, NOS Skeleton 11   
-13 Chondrosarcoma, NOS Skeleton 25   
-14 Chondrosarcoma, NOS Skeleton 28   
-15 Chondrosarcoma, NOS Skeleton 13   
-16 Chondrosarcoma, NOS Skeleton 13   
-17 Chondrosarcoma, NOS Skeleton 20   
-18 Chondrosarcoma, NOS Skeleton 15   
-19 Chondrosarcoma, NOS Skeleton  
-20 Chondrosarcoma, NOS Skeleton 10   
-21 Chondrosarcoma, NOS Skeleton  
-22 Chondrosarcoma, NOS Skeleton 24   
-X Chondrosarcoma, NOS Skeleton 19   
-Y Chondrosarcoma, NOS Skeleton 23