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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

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[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
3q27 t(3;12)(q27;q15) Chondroid hamartoma Lung  
6p21 t(6;10)(p21;q22) Chondroid hamartoma Lung HMGA1+
6p21 t(6;14)(p21;q24) Chondroid hamartoma Lung 11  HMGA1+,RAD51B+
10q11 ins(12;10)(q15;q11q26) Chondroid hamartoma Lung  
10q22 t(6;10)(p21;q22) Chondroid hamartoma Lung HMGA1+
10q26 ins(12;10)(q15;q11q26) Chondroid hamartoma Lung  
12p11 inv(12)(p11q15) Chondroid hamartoma Lung  
12q15 ins(12;10)(q15;q11q26) Chondroid hamartoma Lung  
12q15 inv(12)(p11q15) Chondroid hamartoma Lung  
12q15 inv(12)(q15q22) Chondroid hamartoma Lung  
12q15 t(12;14)(q15;q24) Chondroid hamartoma Lung  
12q15 t(3;12)(q27;q15) Chondroid hamartoma Lung  
12q22 inv(12)(q15q22) Chondroid hamartoma Lung  
14q24 t(12;14)(q15;q24) Chondroid hamartoma Lung  
14q24 t(6;14)(p21;q24) Chondroid hamartoma Lung 11  HMGA1+,RAD51B+

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
6p21 del(6)(p21) Chondroid hamartoma Lung HMGA1+
6p21 der(14)t(6;14)(p21;q24) Chondroid hamartoma Lung  
12q15 del(12)(q15q21) Chondroid hamartoma Lung  
12q15 der(14)t(12;14)(q15;q24) Chondroid hamartoma Lung  
12q21 del(12)(q15q21) Chondroid hamartoma Lung  
14q22 del(14)(q22) Chondroid hamartoma Lung  
14q24 der(14)t(12;14)(q15;q24) Chondroid hamartoma Lung  
14q24 der(14)t(6;14)(p21;q24) Chondroid hamartoma Lung  
15q22 del(15)(q22) Chondroid hamartoma Lung  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+8 Chondroid hamartoma Lung