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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




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[Full Text]

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p11 del(1)(p11) Leiomyosarcoma Soft tissue  
1p12 del(1)(p12) Leiomyosarcoma Soft tissue  
1p13 add(1)(p13) Leiomyosarcoma Soft tissue  
1p22 add(1)(p22) Leiomyosarcoma Soft tissue  
1p32 del(1)(p32) Leiomyosarcoma Soft tissue  
1p36 add(1)(p36) Leiomyosarcoma Soft tissue  
1q11 del(1)(q11) Leiomyosarcoma Soft tissue  
1q12 add(1)(q12) Leiomyosarcoma Soft tissue  
1q12 del(1)(q12) Leiomyosarcoma Soft tissue  
1q21 add(1)(q21) Leiomyosarcoma Soft tissue  
1q32 del(1)(q32) Leiomyosarcoma Soft tissue  
1q42 del(1)(q42) Leiomyosarcoma Soft tissue  
2p11 add(2)(p11) Leiomyosarcoma Soft tissue  
2p11 del(2)(p11) Leiomyosarcoma Soft tissue  
2q11 del(2)(q11) Leiomyosarcoma Soft tissue  
3p11 add(3)(p11) Leiomyosarcoma Soft tissue  
3p11 del(3)(p11) Leiomyosarcoma Soft tissue  
3p13 del(3)(p13) Leiomyosarcoma Soft tissue  
3p14 add(3)(p14) Leiomyosarcoma Soft tissue  
3p21 add(3)(p21) Leiomyosarcoma Soft tissue  
3q11 add(3)(q11) Leiomyosarcoma Soft tissue  
3q11 del(3)(q11) Leiomyosarcoma Soft tissue  
3q12 add(3)(q12) Leiomyosarcoma Soft tissue  
3q12 del(3)(q12) Leiomyosarcoma Soft tissue  
3q25 del(3)(q25) Leiomyosarcoma Soft tissue  
3q27 add(3)(q27) Leiomyosarcoma Soft tissue  
4p14 del(4)(p14) Leiomyosarcoma Soft tissue  
4p16 add(4)(p16) Leiomyosarcoma Soft tissue  
5p11 del(5)(p11) Leiomyosarcoma Soft tissue  
5p13 add(5)(p13) Leiomyosarcoma Soft tissue  
5p15 add(5)(p15) Leiomyosarcoma Soft tissue  
5q11 del(5)(q11) Leiomyosarcoma Soft tissue  
5q35 add(5)(q35) Leiomyosarcoma Soft tissue  
6q11 del(6)(q11) Leiomyosarcoma Soft tissue  
6q11 del(6)(q11) Leiomyosarcoma Uterus, corpus  
6q13 add(6)(q13) Leiomyosarcoma Soft tissue  
6q15 del(6)(q15) Leiomyosarcoma Soft tissue  
6q21 del(6)(q21) Leiomyosarcoma Soft tissue  
7p11 add(7)(p11) Leiomyosarcoma Soft tissue  
7p11 del(7)(p11) Leiomyosarcoma Soft tissue  
7p22 add(7)(p22) Leiomyosarcoma Soft tissue  
7q11 add(7)(q11) Leiomyosarcoma Soft tissue  
7q11 del(7)(q11) Leiomyosarcoma Soft tissue  
7q22 add(7)(q22) Leiomyosarcoma Soft tissue  
7q22 del(7)(q22) Leiomyosarcoma Soft tissue  
7q31 del(7)(q31) Leiomyosarcoma Uterus, corpus  
8p11 add(8)(p11) Leiomyosarcoma Soft tissue  
9p11 add(9)(p11) Leiomyosarcoma Soft tissue  
9q34 add(9)(q34) Leiomyosarcoma Soft tissue  
10p11 add(10)(p11) Leiomyosarcoma Soft tissue  
10p11 del(10)(p11) Leiomyosarcoma Soft tissue  
10p12 del(10)(p12) Leiomyosarcoma Uterus, corpus  
10p15 add(10)(p15) Leiomyosarcoma Soft tissue  
11p11 add(11)(p11) Leiomyosarcoma Soft tissue  
11p12 del(11)(p12) Leiomyosarcoma Soft tissue  
11p15 add(11)(p15) Leiomyosarcoma Soft tissue  
11q11 del(11)(q11) Leiomyosarcoma Soft tissue  
11q14 del(11)(q14) Leiomyosarcoma Soft tissue  
11q21 del(11)(q21) Leiomyosarcoma Soft tissue  
11q22 del(11)(q22) Leiomyosarcoma Uterus, corpus  
11q23 add(11)(q23) Leiomyosarcoma Soft tissue  
11q23 del(11)(q23) Leiomyosarcoma Soft tissue  
12p11 del(12)(p11) Leiomyosarcoma Soft tissue  
12p12 del(12)(p12) Leiomyosarcoma Soft tissue  
12p13 add(12)(p13) Leiomyosarcoma Intraabdominal  
12p13 add(12)(p13) Leiomyosarcoma Soft tissue  
12q24 add(12)(q24) Leiomyosarcoma Soft tissue  
13p11 add(13)(p11) Leiomyosarcoma Soft tissue  
13q22 add(13)(q22) Leiomyosarcoma Soft tissue  
13q22 del(13)(q22) Leiomyosarcoma Soft tissue  
13q32 add(13)(q32) Leiomyosarcoma Soft tissue  
14p11 add(14)(p11) Leiomyosarcoma Intraabdominal  
14p11 add(14)(p11) Leiomyosarcoma Soft tissue  
14p11 der(14)add(14)(p11)add(14)(q32) Leiomyosarcoma Soft tissue  
14q32 add(14)(q32) Leiomyosarcoma Soft tissue  
14q32 der(14)add(14)(p11)add(14)(q32) Leiomyosarcoma Soft tissue  
15p11 add(15)(p11) Leiomyosarcoma Intraabdominal  
15p11 add(15)(p11) Leiomyosarcoma Soft tissue  
15q22 add(15)(q22) Leiomyosarcoma Soft tissue  
16p13 add(16)(p13) Leiomyosarcoma Large intestine  
16p13 add(16)(p13) Leiomyosarcoma Soft tissue  
16q24 add(16)(q24) Leiomyosarcoma Soft tissue  
17p11 add(17)(p11) Leiomyosarcoma Intraabdominal  
17p11 add(17)(p11) Leiomyosarcoma Soft tissue  
17p11 del(17)(p11) Leiomyosarcoma Soft tissue  
17q25 add(17)(q25) Leiomyosarcoma Soft tissue  
18p11 add(18)(p11) Leiomyosarcoma Soft tissue  
18q23 add(18)(q23) Leiomyosarcoma Soft tissue  
19p13 add(19)(p13) Leiomyosarcoma Soft tissue  
19p13 der(19)add(19)(p13)add(19)(q13) Leiomyosarcoma Soft tissue  
19q13 add(19)(q13) Leiomyosarcoma Stomach  
19q13 add(19)(q13) Leiomyosarcoma Soft tissue 11   
19q13 der(19)add(19)(p13)add(19)(q13) Leiomyosarcoma Soft tissue  
20q13 add(20)(q13) Leiomyosarcoma Soft tissue  
21p11 add(21)(p11) Leiomyosarcoma Soft tissue  
22p11 add(22)(p11) Leiomyosarcoma Soft tissue  
22q13 add(22)(q13) Leiomyosarcoma Soft tissue  
Xp22 add(X)(p22) Leiomyosarcoma Soft tissue  
Xq22 del(X)(q22) Leiomyosarcoma Soft tissue  
Xq28 add(X)(q28) Leiomyosarcoma Soft tissue  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+2 Leiomyosarcoma Soft tissue  
+3 Leiomyosarcoma Intraabdominal  
+5 Leiomyosarcoma Soft tissue  
+5 Leiomyosarcoma Stomach  
+6 Leiomyosarcoma Soft tissue  
+7 Leiomyosarcoma Small intestine  
+7 Leiomyosarcoma Soft tissue  
+8 Leiomyosarcoma Soft tissue  
+9 Leiomyosarcoma Soft tissue  
+11 Leiomyosarcoma Soft tissue  
+12 Leiomyosarcoma Soft tissue  
+15 Leiomyosarcoma Soft tissue  
+16 Leiomyosarcoma Soft tissue  
+18 Leiomyosarcoma Soft tissue  
+19 Leiomyosarcoma Stomach  
+19 Leiomyosarcoma Soft tissue  
+19 Leiomyosarcoma Small intestine  
+20 Leiomyosarcoma Soft tissue  
+20 Leiomyosarcoma Stomach  
+21 Leiomyosarcoma Soft tissue  
+22 Leiomyosarcoma Soft tissue  
+X Leiomyosarcoma Intraabdominal  
+Y Leiomyosarcoma Soft tissue  

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Leiomyosarcoma Intraabdominal  
-1 Leiomyosarcoma Soft tissue  
-1 Leiomyosarcoma Stomach  
-2 Leiomyosarcoma Soft tissue 12   
-2 Leiomyosarcoma Stomach  
-2 Leiomyosarcoma Intraabdominal  
-3 Leiomyosarcoma Soft tissue 13   
-3 Leiomyosarcoma Intraabdominal  
-3 Leiomyosarcoma Stomach  
-4 Leiomyosarcoma Intraabdominal  
-4 Leiomyosarcoma Soft tissue 19   
-4 Leiomyosarcoma Uterus, corpus  
-4 Leiomyosarcoma Stomach  
-5 Leiomyosarcoma Stomach  
-5 Leiomyosarcoma Intraabdominal  
-5 Leiomyosarcoma Soft tissue  
-5 Leiomyosarcoma Uterus, corpus  
-6 Leiomyosarcoma Soft tissue 10   
-7 Leiomyosarcoma Stomach  
-7 Leiomyosarcoma Soft tissue  
-7 Leiomyosarcoma Intraabdominal  
-8 Leiomyosarcoma Soft tissue 14   
-8 Leiomyosarcoma Stomach  
-8 Leiomyosarcoma Intraabdominal  
-9 Leiomyosarcoma Stomach  
-9 Leiomyosarcoma Soft tissue 16   
-9 Leiomyosarcoma Uterus, corpus  
-9 Leiomyosarcoma Small intestine  
-10 Leiomyosarcoma Intraabdominal  
-10 Leiomyosarcoma Soft tissue 20   
-10 Leiomyosarcoma Stomach  
-10 Leiomyosarcoma Uterus, corpus  
-11 Leiomyosarcoma Stomach  
-11 Leiomyosarcoma Intraabdominal  
-11 Leiomyosarcoma Uterus, corpus  
-11 Leiomyosarcoma Soft tissue 14   
-12 Leiomyosarcoma Soft tissue 11   
-12 Leiomyosarcoma Stomach  
-12 Leiomyosarcoma Intraabdominal  
-13 Leiomyosarcoma Stomach  
-13 Leiomyosarcoma Small intestine  
-13 Leiomyosarcoma Intraabdominal  
-13 Leiomyosarcoma Soft tissue 20   
-14 Leiomyosarcoma Small intestine  
-14 Leiomyosarcoma Large intestine  
-14 Leiomyosarcoma Intraabdominal  
-14 Leiomyosarcoma Uterus, corpus  
-14 Leiomyosarcoma Soft tissue 12   
-14 Leiomyosarcoma Stomach  
-15 Leiomyosarcoma Soft tissue  
-15 Leiomyosarcoma Uterus, corpus  
-15 Leiomyosarcoma Intraabdominal  
-15 Leiomyosarcoma Large intestine  
-15 Leiomyosarcoma Small intestine  
-15 Leiomyosarcoma Stomach  
-16 Leiomyosarcoma Stomach  
-16 Leiomyosarcoma Soft tissue 17   
-16 Leiomyosarcoma Uterus, corpus  
-17 Leiomyosarcoma Uterus, corpus  
-17 Leiomyosarcoma Soft tissue 20   
-17 Leiomyosarcoma Intraabdominal  
-18 Leiomyosarcoma Stomach  
-18 Leiomyosarcoma Small intestine  
-18 Leiomyosarcoma Uterus, corpus  
-18 Leiomyosarcoma Soft tissue 16   
-18 Leiomyosarcoma Intraabdominal  
-19 Leiomyosarcoma Soft tissue 10   
-19 Leiomyosarcoma Uterus, corpus  
-19 Leiomyosarcoma Intraabdominal  
-19 Leiomyosarcoma Stomach  
-20 Leiomyosarcoma Soft tissue  
-21 Leiomyosarcoma Intraabdominal  
-21 Leiomyosarcoma Soft tissue 11   
-21 Leiomyosarcoma Stomach  
-22 Leiomyosarcoma Small intestine  
-22 Leiomyosarcoma Uterus, corpus  
-22 Leiomyosarcoma Large intestine  
-22 Leiomyosarcoma Stomach  
-22 Leiomyosarcoma Intraabdominal  
-22 Leiomyosarcoma Soft tissue 13   
-X Leiomyosarcoma Intraabdominal  
-X Leiomyosarcoma Stomach  
-X Leiomyosarcoma Uterus, corpus  
-X Leiomyosarcoma Soft tissue 12   
-Y Leiomyosarcoma Stomach  
-Y Leiomyosarcoma Intraabdominal  
-Y Leiomyosarcoma Soft tissue 16