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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

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[Full Text]

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p35 add(1)(p35) Retinoblastoma Eye  
1p36 add(1)(p36) Retinoblastoma Eye  
1q10 i(1)(q10) Retinoblastoma Eye  
1q12 der(14)t(1;14)(q12;q32) Retinoblastoma Eye  
1q12 der(19)t(1;19)(q12;q13) Retinoblastoma Eye  
1q21 der(17)t(1;17)(q21;p13) Retinoblastoma Eye  
6p10 i(6)(p10) Retinoblastoma Eye 46   
6q11 add(6)(q11) Retinoblastoma Eye  
6q12 del(6)(q12) Retinoblastoma Eye  
6q21 del(6)(q21) Retinoblastoma Eye  
6q25 del(6)(q25) Retinoblastoma Eye  
12q24 add(12)(q24) Retinoblastoma Eye  
13q12 del(13)(q12q14) Retinoblastoma Eye  
13q13 del(13)(q13q14) Retinoblastoma Eye  
13q13 del(13)(q13q22) Retinoblastoma Eye  
13q14 del(13)(q12q14) Retinoblastoma Eye  
13q14 del(13)(q13q14) Retinoblastoma Eye  
13q14 del(13)(q14) Retinoblastoma Eye  
13q14 del(13)(q14q14) Retinoblastoma Eye  
13q14 del(13)(q14q14) Retinoblastoma Eye  
13q14 del(13)(q14q21) Retinoblastoma Eye  
13q14 del(13)(q14q33) Retinoblastoma Eye  
13q21 del(13)(q14q21) Retinoblastoma Eye  
13q22 del(13)(q13q22) Retinoblastoma Eye  
13q33 del(13)(q14q33) Retinoblastoma Eye  
14q24 del(14)(q24) Retinoblastoma Eye  
14q32 add(14)(q32) Retinoblastoma Eye  
14q32 der(14)t(1;14)(q12;q32) Retinoblastoma Eye  
16p10 i(16)(p10) Retinoblastoma Eye  
16q13 del(16)(q13) Retinoblastoma Eye  
16q22 del(16)(q22) Retinoblastoma Eye  
17p12 add(17)(p12) Retinoblastoma Eye  
17p13 der(17)t(1;17)(q21;p13) Retinoblastoma Eye  
17q10 i(17)(q10) Retinoblastoma Eye  
18p11 add(18)(p11) Retinoblastoma Eye  
19q13 add(19)(q13) Retinoblastoma Eye  
19q13 der(19)t(1;19)(q12;q13) Retinoblastoma Eye  
20q13 add(20)(q13) Retinoblastoma Eye  
21q10 i(21)(q10) Retinoblastoma Eye  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Retinoblastoma Eye  
+2 Retinoblastoma Eye  
+3 Retinoblastoma Eye  
+5 Retinoblastoma Eye  
+6 Retinoblastoma Eye  
+7 Retinoblastoma Eye  
+8 Retinoblastoma Eye  
+9 Retinoblastoma Eye  
+10 Retinoblastoma Eye  
+11 Retinoblastoma Eye  
+13 Retinoblastoma Eye  
+18 Retinoblastoma Eye  
+19 Retinoblastoma Eye  
+20 Retinoblastoma Eye  
+21 Retinoblastoma Eye  
+22 Retinoblastoma Eye  

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-2 Retinoblastoma Eye  
-3 Retinoblastoma Eye  
-4 Retinoblastoma Eye  
-5 Retinoblastoma Eye  
-6 Retinoblastoma Eye  
-7 Retinoblastoma Eye  
-8 Retinoblastoma Eye  
-9 Retinoblastoma Eye  
-10 Retinoblastoma Eye  
-11 Retinoblastoma Eye  
-12 Retinoblastoma Eye  
-13 Retinoblastoma Eye 13   
-14 Retinoblastoma Eye 10   
-15 Retinoblastoma Eye  
-16 Retinoblastoma Eye 30   
-17 Retinoblastoma Eye 10   
-18 Retinoblastoma Eye  
-19 Retinoblastoma Eye  
-20 Retinoblastoma Eye  
-21 Retinoblastoma Eye  
-22 Retinoblastoma Eye  
-X Retinoblastoma Eye 10   
-Y Retinoblastoma Eye