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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

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[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
9q31 t(9;17)(q31;q24) Neuroglial neoplasm, special type Brain SLC44A1/PRKCA
17q24 t(9;17)(q31;q24) Neuroglial neoplasm, special type Brain SLC44A1/PRKCA

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p22 add(1)(p22) Neuroglial neoplasm, special type Brain  
1q10 i(1)(q10) Neuroglial neoplasm, special type Brain  
7q22 del(7)(q22) Neuroglial neoplasm, special type Brain  
17p11 add(17)(p11) Neuroglial neoplasm, special type Brain  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+2 Neuroglial neoplasm, special type Brain  
+3 Neuroglial neoplasm, special type Brain  
+5 Neuroglial neoplasm, special type Brain  
+6 Neuroglial neoplasm, special type Brain  
+7 Neuroglial neoplasm, special type Brain 10   
+8 Neuroglial neoplasm, special type Brain  
+9 Neuroglial neoplasm, special type Brain  
+16 Neuroglial neoplasm, special type Brain  
+18 Neuroglial neoplasm, special type Brain  
+19 Neuroglial neoplasm, special type Brain  
+20 Neuroglial neoplasm, special type Brain  

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Neuroglial neoplasm, special type Brain  
-2 Neuroglial neoplasm, special type Brain  
-3 Neuroglial neoplasm, special type Brain  
-4 Neuroglial neoplasm, special type Brain  
-5 Neuroglial neoplasm, special type Brain  
-6 Neuroglial neoplasm, special type Brain  
-7 Neuroglial neoplasm, special type Brain  
-8 Neuroglial neoplasm, special type Brain  
-9 Neuroglial neoplasm, special type Brain  
-10 Neuroglial neoplasm, special type Brain  
-11 Neuroglial neoplasm, special type Brain  
-12 Neuroglial neoplasm, special type Brain  
-13 Neuroglial neoplasm, special type Brain  
-14 Neuroglial neoplasm, special type Brain  
-15 Neuroglial neoplasm, special type Brain  
-16 Neuroglial neoplasm, special type Brain  
-17 Neuroglial neoplasm, special type Brain  
-18 Neuroglial neoplasm, special type Brain  
-19 Neuroglial neoplasm, special type Brain  
-20 Neuroglial neoplasm, special type Brain  
-21 Neuroglial neoplasm, special type Brain  
-22 Neuroglial neoplasm, special type Brain  
-X Neuroglial neoplasm, special type Brain  
-Y Neuroglial neoplasm, special type Brain