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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

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[Full Text]

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p11 add(1)(p11) Seminoma/Dysgerminoma Testis  
1p11 del(1)(p11) Seminoma/Dysgerminoma Testis  
1p13 add(1)(p13) Seminoma/Dysgerminoma Testis  
1p13 del(1)(p13) Seminoma/Dysgerminoma Testis  
1p22 add(1)(p22) Seminoma/Dysgerminoma Testis  
1p36 add(1)(p36) Seminoma/Dysgerminoma Testis  
1p36 del(1)(p36) Seminoma/Dysgerminoma Testis  
1q10 i(1)(q10) Seminoma/Dysgerminoma Testis  
1q11 add(1)(q11) Seminoma/Dysgerminoma Testis  
1q21 add(1)(q21) Seminoma/Dysgerminoma Testis  
1q32 add(1)(q32) Seminoma/Dysgerminoma Testis  
2q10 i(2)(q10) Seminoma/Dysgerminoma Testis  
3q24 add(3)(q24) Seminoma/Dysgerminoma Testis  
4p16 add(4)(p16) Seminoma/Dysgerminoma Testis  
4q10 i(4)(q10) Seminoma/Dysgerminoma Testis  
4q34 add(4)(q34) Seminoma/Dysgerminoma Testis  
4q35 add(4)(q35) Seminoma/Dysgerminoma Testis  
6p10 i(6)(p10) Seminoma/Dysgerminoma Testis  
6p23 add(6)(p23) Seminoma/Dysgerminoma Testis  
6q12 del(6)(q12) Seminoma/Dysgerminoma Testis  
6q21 del(6)(q21) Seminoma/Dysgerminoma Testis  
6q21 del(6)(q21q23) Seminoma/Dysgerminoma Testis  
6q23 del(6)(q21q23) Seminoma/Dysgerminoma Testis  
6q27 add(6)(q27) Seminoma/Dysgerminoma Testis  
7q21 add(7)(q21) Seminoma/Dysgerminoma Testis  
7q22 add(7)(q22) Seminoma/Dysgerminoma Testis  
7q31 add(7)(q31) Seminoma/Dysgerminoma Testis  
7q32 add(7)(q32) Seminoma/Dysgerminoma Testis  
8p11 add(8)(p11) Seminoma/Dysgerminoma Testis  
8q10 i(8)(q10) Seminoma/Dysgerminoma Testis  
9p22 add(9)(p22) Seminoma/Dysgerminoma Testis  
9p24 add(9)(p24) Seminoma/Dysgerminoma Testis  
9q34 add(9)(q34) Seminoma/Dysgerminoma Testis  
11p11 add(11)(p11) Seminoma/Dysgerminoma Testis  
11p15 add(11)(p15) Seminoma/Dysgerminoma Testis  
11q23 add(11)(q23) Seminoma/Dysgerminoma Testis  
11q23 del(11)(q23) Seminoma/Dysgerminoma Testis  
12p10 i(12)(p10) Seminoma/Dysgerminoma Testis 48   
12p11 add(12)(p11) Seminoma/Dysgerminoma Testis  
12p12 add(12)(p12) Seminoma/Dysgerminoma Testis  
12p13 add(12)(p13) Seminoma/Dysgerminoma Testis  
12q24 add(12)(q24) Seminoma/Dysgerminoma Testis  
14q32 add(14)(q32) Seminoma/Dysgerminoma Testis  
15p11 add(15)(p11) Seminoma/Dysgerminoma Testis  
15q22 add(15)(q22) Seminoma/Dysgerminoma Testis  
16q13 add(16)(q13) Seminoma/Dysgerminoma Testis  
16q21 add(16)(q21) Seminoma/Dysgerminoma Testis  
16q24 add(16)(q24) Seminoma/Dysgerminoma Testis  
17p11 add(17)(p11) Seminoma/Dysgerminoma Testis  
17q10 i(17)(q10) Seminoma/Dysgerminoma Testis  
17q25 add(17)(q25) Seminoma/Dysgerminoma Testis  
18q23 add(18)(q23) Seminoma/Dysgerminoma Testis  
19q13 add(19)(q13) Seminoma/Dysgerminoma Testis  
21p12 add(21)(p12) Seminoma/Dysgerminoma Testis  
22q13 add(22)(q13) Seminoma/Dysgerminoma Testis  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Seminoma/Dysgerminoma Testis  
+2 Seminoma/Dysgerminoma Testis 11   
+3 Seminoma/Dysgerminoma Testis 12   
+4 Seminoma/Dysgerminoma Testis  
+6 Seminoma/Dysgerminoma Testis  
+7 Seminoma/Dysgerminoma Testis 33   
+8 Seminoma/Dysgerminoma Testis 35   
+10 Seminoma/Dysgerminoma Testis  
+11 Seminoma/Dysgerminoma Testis  
+12 Seminoma/Dysgerminoma Testis 21   
+13 Seminoma/Dysgerminoma Testis  
+14 Seminoma/Dysgerminoma Testis 15   
+15 Seminoma/Dysgerminoma Testis 26   
+16 Seminoma/Dysgerminoma Testis  
+17 Seminoma/Dysgerminoma Testis  
+18 Seminoma/Dysgerminoma Testis  
+19 Seminoma/Dysgerminoma Testis 15   
+20 Seminoma/Dysgerminoma Testis 10   
+21 Seminoma/Dysgerminoma Testis 38   
+22 Seminoma/Dysgerminoma Testis 17   
+X Seminoma/Dysgerminoma Testis 12   
+Y Seminoma/Dysgerminoma Testis 18   

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Seminoma/Dysgerminoma Testis  
-2 Seminoma/Dysgerminoma Testis 12   
-3 Seminoma/Dysgerminoma Testis 14   
-4 Seminoma/Dysgerminoma Testis 43   
-5 Seminoma/Dysgerminoma Testis 54   
-6 Seminoma/Dysgerminoma Testis 11   
-7 Seminoma/Dysgerminoma Testis  
-8 Seminoma/Dysgerminoma Testis  
-9 Seminoma/Dysgerminoma Testis 38   
-10 Seminoma/Dysgerminoma Testis 38   
-11 Seminoma/Dysgerminoma Testis 48   
-12 Seminoma/Dysgerminoma Testis  
-13 Seminoma/Dysgerminoma Testis 59   
-14 Seminoma/Dysgerminoma Testis 20   
-15 Seminoma/Dysgerminoma Testis 16   
-16 Seminoma/Dysgerminoma Testis 26   
-17 Seminoma/Dysgerminoma Testis 37   
-18 Seminoma/Dysgerminoma Testis 52   
-19 Seminoma/Dysgerminoma Testis 16   
-20 Seminoma/Dysgerminoma Testis 15   
-21 Seminoma/Dysgerminoma Testis 13   
-22 Seminoma/Dysgerminoma Testis 16   
-X Seminoma/Dysgerminoma Testis  
-Y Seminoma/Dysgerminoma Testis 20