Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Chromosomes
  • Tools
  • Genetic and Physical SNP Maps
  • SNP500Cancer
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

Expand Gene List:




[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
3p14 t(3;5)(p14;p14) Transitional cell carcinoma Bladder  
5p14 t(3;5)(p14;p14) Transitional cell carcinoma Bladder  

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p11 del(1)(p11) Transitional cell carcinoma Bladder  
1p22 del(1)(p22) Transitional cell carcinoma Bladder  
1q10 i(1)(q10) Transitional cell carcinoma Bladder  
1q12 del(1)(q12) Transitional cell carcinoma Bladder  
1q21 del(1)(q21) Transitional cell carcinoma Bladder  
3q21 add(3)(q21) Transitional cell carcinoma Bladder  
3q21 del(3)(q21) Transitional cell carcinoma Bladder  
3q25 del(3)(q25) Transitional cell carcinoma Bladder  
5p10 i(5)(p10) Transitional cell carcinoma Bladder 11   
5q11 del(5)(q11q13) Transitional cell carcinoma Bladder  
5q13 del(5)(q11q13) Transitional cell carcinoma Bladder  
5q13 del(5)(q13) Transitional cell carcinoma Bladder  
6p10 i(6)(p10) Transitional cell carcinoma Bladder  
6q13 del(6)(q13) Transitional cell carcinoma Bladder  
6q15 del(6)(q15) Transitional cell carcinoma Bladder  
6q21 del(6)(q21) Transitional cell carcinoma Bladder  
7q10 i(7)(q10) Transitional cell carcinoma Bladder  
7q22 del(7)(q22) Transitional cell carcinoma Bladder  
8p11 add(8)(p11) Transitional cell carcinoma Bladder  
8p11 del(8)(p11) Transitional cell carcinoma Bladder  
8p21 del(8)(p21) Transitional cell carcinoma Bladder  
8q10 i(8)(q10) Transitional cell carcinoma Bladder  
9q22 del(9)(q22) Transitional cell carcinoma Bladder  
10q22 del(10)(q22) Transitional cell carcinoma Bladder  
10q22 del(10)(q22q24) Transitional cell carcinoma Bladder  
10q24 del(10)(q22q24) Transitional cell carcinoma Bladder  
10q24 del(10)(q24) Transitional cell carcinoma Bladder  
11p11 add(11)(p11) Transitional cell carcinoma Bladder  
11p13 del(11)(p13) Transitional cell carcinoma Bladder  
11p15 add(11)(p15) Transitional cell carcinoma Bladder  
11q10 i(11)(q10) Transitional cell carcinoma Bladder  
13q10 i(13)(q10) Transitional cell carcinoma Bladder  
14q24 del(14)(q24) Transitional cell carcinoma Bladder  
19p13 add(19)(p13) Transitional cell carcinoma Bladder  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Transitional cell carcinoma Bladder  
+2 Transitional cell carcinoma Bladder  
+3 Transitional cell carcinoma Bladder  
+4 Transitional cell carcinoma Bladder  
+5 Transitional cell carcinoma Bladder  
+6 Transitional cell carcinoma Bladder  
+7 Transitional cell carcinoma Bladder 21   
+8 Transitional cell carcinoma Bladder  
+9 Transitional cell carcinoma Bladder  
+10 Transitional cell carcinoma Bladder  
+11 Transitional cell carcinoma Bladder  
+12 Transitional cell carcinoma Bladder  
+13 Transitional cell carcinoma Bladder  
+14 Transitional cell carcinoma Bladder  
+15 Transitional cell carcinoma Bladder  
+16 Transitional cell carcinoma Bladder  
+17 Transitional cell carcinoma Bladder  
+18 Transitional cell carcinoma Bladder  
+19 Transitional cell carcinoma Bladder  
+20 Transitional cell carcinoma Bladder 12   
+21 Transitional cell carcinoma Bladder  
+22 Transitional cell carcinoma Bladder  
+X Transitional cell carcinoma Bladder  
+Y Transitional cell carcinoma Bladder  

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Transitional cell carcinoma Bladder  
-2 Transitional cell carcinoma Bladder 12   
-3 Transitional cell carcinoma Bladder  
-4 Transitional cell carcinoma Bladder 11   
-5 Transitional cell carcinoma Bladder 13   
-6 Transitional cell carcinoma Bladder  
-7 Transitional cell carcinoma Bladder  
-8 Transitional cell carcinoma Bladder 17   
-9 Transitional cell carcinoma Bladder 56   
-10 Transitional cell carcinoma Bladder 16   
-11 Transitional cell carcinoma Bladder 15   
-12 Transitional cell carcinoma Bladder  
-13 Transitional cell carcinoma Bladder 12   
-14 Transitional cell carcinoma Bladder 13   
-15 Transitional cell carcinoma Bladder 17   
-16 Transitional cell carcinoma Bladder 17   
-17 Transitional cell carcinoma Bladder 10   
-18 Transitional cell carcinoma Bladder 17   
-19 Transitional cell carcinoma Bladder  
-20 Transitional cell carcinoma Bladder  
-21 Transitional cell carcinoma Bladder 12   
-22 Transitional cell carcinoma Bladder 14   
-X Transitional cell carcinoma Bladder 10   
-Y Transitional cell carcinoma Bladder 33