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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

Expand Gene List:




[Full Text]

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1q10 i(1)(q10) Squamous cell carcinoma Uterus, cervix  
2q10 i(2)(q10) Squamous cell carcinoma Uterus, cervix  
6q10 i(6)(q10) Squamous cell carcinoma Uterus, cervix  
6q21 del(6)(q21) Squamous cell carcinoma Uterus, cervix  
17q10 i(17)(q10) Squamous cell carcinoma Uterus, cervix  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Squamous cell carcinoma Uterus, cervix  
+2 Squamous cell carcinoma Uterus, cervix  
+3 Squamous cell carcinoma Uterus, cervix  
+10 Squamous cell carcinoma Uterus, cervix  
+12 Squamous cell carcinoma Uterus, cervix  
+16 Squamous cell carcinoma Uterus, cervix  
+17 Squamous cell carcinoma Uterus, cervix  
+19 Squamous cell carcinoma Uterus, cervix  
+20 Squamous cell carcinoma Uterus, cervix  
+21 Squamous cell carcinoma Uterus, cervix  
+X Squamous cell carcinoma Uterus, cervix  

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Squamous cell carcinoma Uterus, cervix  
-2 Squamous cell carcinoma Uterus, cervix  
-3 Squamous cell carcinoma Uterus, cervix  
-4 Squamous cell carcinoma Uterus, cervix 13   
-5 Squamous cell carcinoma Uterus, cervix  
-6 Squamous cell carcinoma Uterus, cervix  
-7 Squamous cell carcinoma Uterus, cervix  
-8 Squamous cell carcinoma Uterus, cervix  
-9 Squamous cell carcinoma Uterus, cervix  
-10 Squamous cell carcinoma Uterus, cervix  
-11 Squamous cell carcinoma Uterus, cervix  
-12 Squamous cell carcinoma Uterus, cervix  
-13 Squamous cell carcinoma Uterus, cervix  
-14 Squamous cell carcinoma Uterus, cervix  
-15 Squamous cell carcinoma Uterus, cervix  
-16 Squamous cell carcinoma Uterus, cervix  
-17 Squamous cell carcinoma Uterus, cervix  
-18 Squamous cell carcinoma Uterus, cervix  
-19 Squamous cell carcinoma Uterus, cervix  
-20 Squamous cell carcinoma Uterus, cervix  
-21 Squamous cell carcinoma Uterus, cervix  
-22 Squamous cell carcinoma Uterus, cervix  
-X Squamous cell carcinoma Uterus, cervix