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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

Expand Gene List:




[Full Text]

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1q12 del(1)(q12) Adenocarcinoma Prostate  
3p13 del(3)(p13) Adenocarcinoma Prostate  
3q21 add(3)(q21) Adenocarcinoma Prostate  
6q23 del(6)(q23) Adenocarcinoma Prostate  
7q22 del(7)(q22) Adenocarcinoma Prostate  
7q22 dup(7)(q22q32) Adenocarcinoma Prostate  
7q32 dup(7)(q22q32) Adenocarcinoma Prostate  
8p21 del(8)(p21) Adenocarcinoma Prostate  
8q10 i(8)(q10) Adenocarcinoma Prostate  
8q24 add(8)(q24) Adenocarcinoma Prostate  
10p13 del(10)(p13) Adenocarcinoma Prostate  
10q24 add(10)(q24) Adenocarcinoma Prostate  
10q24 del(10)(q24) Adenocarcinoma Prostate  
16q22 del(16)(q22) Adenocarcinoma Prostate  
17p11 del(17)(p11) Adenocarcinoma Prostate  
19p13 add(19)(p13) Adenocarcinoma Prostate  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Adenocarcinoma Prostate  
+3 Adenocarcinoma Prostate  
+5 Adenocarcinoma Prostate  
+7 Adenocarcinoma Prostate 23   
+8 Adenocarcinoma Prostate  
+9 Adenocarcinoma Prostate  
+12 Adenocarcinoma Prostate  
+13 Adenocarcinoma Prostate  
+18 Adenocarcinoma Prostate  
+20 Adenocarcinoma Prostate  
+21 Adenocarcinoma Prostate  
+22 Adenocarcinoma Prostate  
+Y Adenocarcinoma Prostate  

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Adenocarcinoma Prostate  
-2 Adenocarcinoma Prostate  
-4 Adenocarcinoma Prostate  
-5 Adenocarcinoma Prostate  
-6 Adenocarcinoma Prostate  
-8 Adenocarcinoma Prostate 10   
-9 Adenocarcinoma Prostate  
-10 Adenocarcinoma Prostate  
-11 Adenocarcinoma Prostate  
-12 Adenocarcinoma Prostate  
-13 Adenocarcinoma Prostate  
-14 Adenocarcinoma Prostate  
-15 Adenocarcinoma Prostate  
-16 Adenocarcinoma Prostate  
-17 Adenocarcinoma Prostate  
-18 Adenocarcinoma Prostate  
-19 Adenocarcinoma Prostate  
-20 Adenocarcinoma Prostate  
-21 Adenocarcinoma Prostate  
-22 Adenocarcinoma Prostate  
-Y Adenocarcinoma Prostate 67