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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

Expand Gene List:




[Full Text]

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p36 add(1)(p36) Adenocarcinoma Gallbladder/Biliary system  
3p13 del(3)(p13) Adenocarcinoma Gallbladder/Biliary system  
3p21 add(3)(p21) Adenocarcinoma Gallbladder/Biliary system  
5p10 i(5)(p10) Adenocarcinoma Gallbladder/Biliary system  
5p11 add(5)(p11) Adenocarcinoma Gallbladder/Biliary system  
5q11 add(5)(q11) Adenocarcinoma Gallbladder/Biliary system  
6q13 del(6)(q13) Adenocarcinoma Gallbladder/Biliary system  
6q21 del(6)(q21) Adenocarcinoma Gallbladder/Biliary system  
7q32 add(7)(q32) Adenocarcinoma Gallbladder/Biliary system  
8q10 i(8)(q10) Adenocarcinoma Gallbladder/Biliary system  
9p22 del(9)(p22) Adenocarcinoma Gallbladder/Biliary system  
10p11 add(10)(p11) Adenocarcinoma Gallbladder/Biliary system  
11p11 add(11)(p11) Adenocarcinoma Gallbladder/Biliary system  
13q22 add(13)(q22) Adenocarcinoma Gallbladder/Biliary system  
17p11 del(17)(p11) Adenocarcinoma Gallbladder/Biliary system  
17q10 i(17)(q10) Adenocarcinoma Gallbladder/Biliary system  
18q21 add(18)(q21) Adenocarcinoma Gallbladder/Biliary system  
19p13 add(19)(p13) Adenocarcinoma Gallbladder/Biliary system  
21q10 i(21)(q10) Adenocarcinoma Gallbladder/Biliary system  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Adenocarcinoma Gallbladder/Biliary system  
+2 Adenocarcinoma Gallbladder/Biliary system  
+4 Adenocarcinoma Gallbladder/Biliary system  
+5 Adenocarcinoma Gallbladder/Biliary system  
+7 Adenocarcinoma Gallbladder/Biliary system  
+11 Adenocarcinoma Gallbladder/Biliary system  
+12 Adenocarcinoma Gallbladder/Biliary system  
+13 Adenocarcinoma Gallbladder/Biliary system  
+15 Adenocarcinoma Gallbladder/Biliary system  
+16 Adenocarcinoma Gallbladder/Biliary system  
+17 Adenocarcinoma Gallbladder/Biliary system  
+19 Adenocarcinoma Gallbladder/Biliary system  
+20 Adenocarcinoma Gallbladder/Biliary system  
+X Adenocarcinoma Gallbladder/Biliary system  

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Adenocarcinoma Gallbladder/Biliary system  
-2 Adenocarcinoma Gallbladder/Biliary system  
-4 Adenocarcinoma Gallbladder/Biliary system  
-5 Adenocarcinoma Gallbladder/Biliary system  
-6 Adenocarcinoma Gallbladder/Biliary system  
-7 Adenocarcinoma Gallbladder/Biliary system  
-8 Adenocarcinoma Gallbladder/Biliary system  
-9 Adenocarcinoma Gallbladder/Biliary system  
-10 Adenocarcinoma Gallbladder/Biliary system  
-12 Adenocarcinoma Gallbladder/Biliary system  
-13 Adenocarcinoma Gallbladder/Biliary system  
-14 Adenocarcinoma Gallbladder/Biliary system  
-15 Adenocarcinoma Gallbladder/Biliary system  
-16 Adenocarcinoma Gallbladder/Biliary system  
-17 Adenocarcinoma Gallbladder/Biliary system  
-18 Adenocarcinoma Gallbladder/Biliary system 10   
-20 Adenocarcinoma Gallbladder/Biliary system  
-21 Adenocarcinoma Gallbladder/Biliary system  
-22 Adenocarcinoma Gallbladder/Biliary system  
-X Adenocarcinoma Gallbladder/Biliary system  
-Y Adenocarcinoma Gallbladder/Biliary system