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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

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[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
3q21 t(3;5)(q21;q31) Adenocarcinoma Stomach  
5q31 t(3;5)(q21;q31) Adenocarcinoma Stomach  

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p13 add(1)(p13) Adenocarcinoma Stomach  
1p22 del(1)(p22) Adenocarcinoma Stomach  
1p36 add(1)(p36) Adenocarcinoma Stomach  
1q10 i(1)(q10) Adenocarcinoma Stomach  
1q41 del(1)(q41) Adenocarcinoma Stomach  
2q10 i(2)(q10) Adenocarcinoma Stomach  
2q33 del(2)(q33) Adenocarcinoma Stomach  
3p11 add(3)(p11) Adenocarcinoma Stomach  
3p11 del(3)(p11) Adenocarcinoma Stomach  
3p13 del(3)(p13) Adenocarcinoma Stomach  
3p21 add(3)(p21) Adenocarcinoma Stomach  
3p21 del(3)(p21) Adenocarcinoma Stomach  
3p26 add(3)(p26) Adenocarcinoma Stomach  
3q11 del(3)(q11) Adenocarcinoma Stomach  
3q12 del(3)(q12) Adenocarcinoma Stomach  
3q13 add(3)(q13) Adenocarcinoma Stomach  
3q13 del(3)(q13) Adenocarcinoma Stomach  
3q21 del(3)(q21) Adenocarcinoma Stomach  
5p10 i(5)(p10) Adenocarcinoma Stomach  
6q15 del(6)(q15) Adenocarcinoma Stomach  
6q21 del(6)(q21) Adenocarcinoma Stomach  
6q22 del(6)(q22) Adenocarcinoma Stomach  
6q27 add(6)(q27) Adenocarcinoma Stomach  
7p21 add(7)(p21) Adenocarcinoma Stomach  
7p22 add(7)(p22) Adenocarcinoma Stomach  
7q21 del(7)(q21) Adenocarcinoma Stomach  
7q22 add(7)(q22) Adenocarcinoma Stomach  
7q22 del(7)(q22) Adenocarcinoma Stomach  
7q31 del(7)(q31) Adenocarcinoma Stomach  
7q32 add(7)(q32) Adenocarcinoma Stomach  
7q32 del(7)(q32) Adenocarcinoma Stomach  
7q33 add(7)(q33) Adenocarcinoma Stomach  
8q10 i(8)(q10) Adenocarcinoma Stomach 11   
9p24 add(9)(p24) Adenocarcinoma Stomach  
9q10 i(9)(q10) Adenocarcinoma Stomach  
10q23 del(10)(q23) Adenocarcinoma Stomach  
10q24 del(10)(q24) Adenocarcinoma Stomach  
10q26 add(10)(q26) Adenocarcinoma Stomach  
11p11 add(11)(p11) Adenocarcinoma Stomach  
11p13 add(11)(p13) Adenocarcinoma Stomach  
12p10 i(12)(p10) Adenocarcinoma Stomach  
12p11 add(12)(p11) Adenocarcinoma Stomach  
12p12 del(12)(p12) Adenocarcinoma Stomach  
12p12 der(12)add(12)(p12)del(12)(q24) Adenocarcinoma Stomach  
12p13 add(12)(p13) Adenocarcinoma Stomach  
12q24 del(12)(q24) Adenocarcinoma Stomach  
12q24 der(12)add(12)(p12)del(12)(q24) Adenocarcinoma Stomach  
13p11 add(13)(p11) Adenocarcinoma Stomach  
13q10 der(13;14)(q10;q10) Adenocarcinoma Stomach  
13q10 i(13)(q10) Adenocarcinoma Stomach  
14p11 add(14)(p11) Adenocarcinoma Stomach  
14q10 der(13;14)(q10;q10) Adenocarcinoma Stomach  
15p11 add(15)(p11) Adenocarcinoma Stomach  
17p11 add(17)(p11) Adenocarcinoma Stomach  
17p12 del(17)(p12) Adenocarcinoma Stomach  
17p13 add(17)(p13) Adenocarcinoma Stomach  
17q10 i(17)(q10) Adenocarcinoma Stomach  
18q21 del(18)(q21) Adenocarcinoma Stomach  
21p11 add(21)(p11) Adenocarcinoma Stomach  
22p11 add(22)(p11) Adenocarcinoma Stomach  
22q13 del(22)(q13) Adenocarcinoma Stomach  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Adenocarcinoma Stomach  
+2 Adenocarcinoma Stomach  
+3 Adenocarcinoma Stomach  
+4 Adenocarcinoma Stomach  
+5 Adenocarcinoma Stomach  
+6 Adenocarcinoma Stomach  
+7 Adenocarcinoma Stomach 20   
+8 Adenocarcinoma Stomach 29   
+9 Adenocarcinoma Stomach 12   
+10 Adenocarcinoma Stomach  
+11 Adenocarcinoma Stomach  
+12 Adenocarcinoma Stomach 11   
+13 Adenocarcinoma Stomach 13   
+14 Adenocarcinoma Stomach  
+15 Adenocarcinoma Stomach  
+16 Adenocarcinoma Stomach 10   
+17 Adenocarcinoma Stomach  
+18 Adenocarcinoma Stomach  
+19 Adenocarcinoma Stomach  
+20 Adenocarcinoma Stomach 26   
+21 Adenocarcinoma Stomach  
+22 Adenocarcinoma Stomach  
+X Adenocarcinoma Stomach 11   
+Y Adenocarcinoma Stomach  

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Adenocarcinoma Stomach 18   
-2 Adenocarcinoma Stomach 13   
-3 Adenocarcinoma Stomach 14   
-4 Adenocarcinoma Stomach 21   
-5 Adenocarcinoma Stomach 18   
-6 Adenocarcinoma Stomach 11   
-7 Adenocarcinoma Stomach  
-8 Adenocarcinoma Stomach 15   
-9 Adenocarcinoma Stomach 28   
-10 Adenocarcinoma Stomach 23   
-11 Adenocarcinoma Stomach  
-12 Adenocarcinoma Stomach 16   
-13 Adenocarcinoma Stomach 17   
-14 Adenocarcinoma Stomach 25   
-15 Adenocarcinoma Stomach 21   
-16 Adenocarcinoma Stomach 25   
-17 Adenocarcinoma Stomach 27   
-18 Adenocarcinoma Stomach 36   
-19 Adenocarcinoma Stomach 14   
-20 Adenocarcinoma Stomach 16   
-21 Adenocarcinoma Stomach 29   
-22 Adenocarcinoma Stomach 30   
-X Adenocarcinoma Stomach 25   
-Y Adenocarcinoma Stomach 32