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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

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[Full Text]

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p36 add(1)(p36) Hodgkin disease, mixed cellularity    
1q10 i(1)(q10) Hodgkin disease, mixed cellularity    
1q41 del(1)(q41) Hodgkin disease, mixed cellularity    
2p25 add(2)(p25) Hodgkin disease, mixed cellularity    
3q26 del(3)(q26) Hodgkin disease, mixed cellularity    
4p16 add(4)(p16) Hodgkin disease, mixed cellularity    
5p15 add(5)(p15) Hodgkin disease, mixed cellularity    
5q35 add(5)(q35) Hodgkin disease, mixed cellularity    
6q21 del(6)(q21) Hodgkin disease, mixed cellularity    
7q35 add(7)(q35) Hodgkin disease, mixed cellularity    
8p23 add(8)(p23) Hodgkin disease, mixed cellularity    
8q24 add(8)(q24) Hodgkin disease, mixed cellularity    
9p21 add(9)(p21) Hodgkin disease, mixed cellularity    
11q23 add(11)(q23) Hodgkin disease, mixed cellularity    
12p13 add(12)(p13) Hodgkin disease, mixed cellularity    
12p13 del(12)(p13) Hodgkin disease, mixed cellularity    
12q24 add(12)(q24) Hodgkin disease, mixed cellularity    
13p11 add(13)(p11) Hodgkin disease, mixed cellularity    
13p13 add(13)(p13) Hodgkin disease, mixed cellularity    
14p11 add(14)(p11) Hodgkin disease, mixed cellularity    
14q32 add(14)(q32) Hodgkin disease, mixed cellularity    
14q32 der(14)(q32) Hodgkin disease, mixed cellularity    
15p11 add(15)(p11) Hodgkin disease, mixed cellularity    
17p13 add(17)(p13) Hodgkin disease, mixed cellularity    
18p11 add(18)(p11) Hodgkin disease, mixed cellularity    
18q10 i(18)(q10) Hodgkin disease, mixed cellularity    
19p13 add(19)(p13) Hodgkin disease, mixed cellularity    
19q13 add(19)(q13) Hodgkin disease, mixed cellularity    
21p13 add(21)(p13) Hodgkin disease, mixed cellularity    
21q10 i(21)(q10) Hodgkin disease, mixed cellularity    

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Hodgkin disease, mixed cellularity    
+2 Hodgkin disease, mixed cellularity   13   
+3 Hodgkin disease, mixed cellularity    
+4 Hodgkin disease, mixed cellularity    
+5 Hodgkin disease, mixed cellularity    
+6 Hodgkin disease, mixed cellularity    
+8 Hodgkin disease, mixed cellularity    
+9 Hodgkin disease, mixed cellularity    
+10 Hodgkin disease, mixed cellularity    
+11 Hodgkin disease, mixed cellularity    
+12 Hodgkin disease, mixed cellularity    
+14 Hodgkin disease, mixed cellularity    
+15 Hodgkin disease, mixed cellularity    
+16 Hodgkin disease, mixed cellularity    
+17 Hodgkin disease, mixed cellularity    
+18 Hodgkin disease, mixed cellularity    
+19 Hodgkin disease, mixed cellularity   11   
+20 Hodgkin disease, mixed cellularity    
+21 Hodgkin disease, mixed cellularity    
+22 Hodgkin disease, mixed cellularity    
+X Hodgkin disease, mixed cellularity    

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Hodgkin disease, mixed cellularity    
-2 Hodgkin disease, mixed cellularity    
-3 Hodgkin disease, mixed cellularity    
-4 Hodgkin disease, mixed cellularity    
-5 Hodgkin disease, mixed cellularity    
-6 Hodgkin disease, mixed cellularity    
-7 Hodgkin disease, mixed cellularity   12   
-8 Hodgkin disease, mixed cellularity    
-9 Hodgkin disease, mixed cellularity   10   
-10 Hodgkin disease, mixed cellularity   14   
-11 Hodgkin disease, mixed cellularity    
-12 Hodgkin disease, mixed cellularity    
-13 Hodgkin disease, mixed cellularity   18   
-14 Hodgkin disease, mixed cellularity    
-15 Hodgkin disease, mixed cellularity   15   
-16 Hodgkin disease, mixed cellularity   12   
-17 Hodgkin disease, mixed cellularity   13   
-18 Hodgkin disease, mixed cellularity    
-19 Hodgkin disease, mixed cellularity    
-20 Hodgkin disease, mixed cellularity    
-21 Hodgkin disease, mixed cellularity   11   
-22 Hodgkin disease, mixed cellularity   17   
-X Hodgkin disease, mixed cellularity   11   
-Y Hodgkin disease, mixed cellularity   16