Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Chromosomes
  • Tools
  • Genetic and Physical SNP Maps
  • SNP500Cancer
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

Expand Gene List:




[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
3q27 t(3;5)(q27;q31) Hodgkin disease, lymphocyte predominance    
5q31 t(3;5)(q27;q31) Hodgkin disease, lymphocyte predominance    

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1q10 i(1)(q10) Hodgkin disease, lymphocyte predominance   11   
3p21 add(3)(p21) Hodgkin disease, lymphocyte predominance    
4q28 del(4)(q28) Hodgkin disease, lymphocyte predominance    
7p21 add(7)(p21) Hodgkin disease, lymphocyte predominance    
7q31 add(7)(q31) Hodgkin disease, lymphocyte predominance    
7q36 add(7)(q36) Hodgkin disease, lymphocyte predominance    
9p24 add(9)(p24) Hodgkin disease, lymphocyte predominance    
14q32 add(14)(q32) Hodgkin disease, lymphocyte predominance    

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+2 Hodgkin disease, lymphocyte predominance    
+5 Hodgkin disease, lymphocyte predominance    
+7 Hodgkin disease, lymphocyte predominance    
+8 Hodgkin disease, lymphocyte predominance    
+12 Hodgkin disease, lymphocyte predominance    
+16 Hodgkin disease, lymphocyte predominance    
+20 Hodgkin disease, lymphocyte predominance    
+21 Hodgkin disease, lymphocyte predominance    

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Hodgkin disease, lymphocyte predominance    
-2 Hodgkin disease, lymphocyte predominance    
-3 Hodgkin disease, lymphocyte predominance    
-4 Hodgkin disease, lymphocyte predominance    
-5 Hodgkin disease, lymphocyte predominance    
-7 Hodgkin disease, lymphocyte predominance    
-9 Hodgkin disease, lymphocyte predominance    
-10 Hodgkin disease, lymphocyte predominance    
-13 Hodgkin disease, lymphocyte predominance    
-14 Hodgkin disease, lymphocyte predominance    
-15 Hodgkin disease, lymphocyte predominance    
-17 Hodgkin disease, lymphocyte predominance    
-18 Hodgkin disease, lymphocyte predominance    
-19 Hodgkin disease, lymphocyte predominance    
-20 Hodgkin disease, lymphocyte predominance    
-21 Hodgkin disease, lymphocyte predominance    
-X Hodgkin disease, lymphocyte predominance    
-Y Hodgkin disease, lymphocyte predominance