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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

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[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
3p25 inv(3)(p25q21) Adult T-cell lymphoma/leukemia (HTLV-1+)    
3q21 inv(3)(p25q21) Adult T-cell lymphoma/leukemia (HTLV-1+)    
9p24 t(9;21)(p24;q21) Adult T-cell lymphoma/leukemia (HTLV-1+)    
10p11 t(10;14)(p11;q32) Adult T-cell lymphoma/leukemia (HTLV-1+)    
14q11 inv(14)(q11q32) Adult T-cell lymphoma/leukemia (HTLV-1+)   10  TRA+
14q11 t(14;14)(q11;q32) Adult T-cell lymphoma/leukemia (HTLV-1+)   TRA+
14q32 inv(14)(q11q32) Adult T-cell lymphoma/leukemia (HTLV-1+)   10  TRA+
14q32 t(10;14)(p11;q32) Adult T-cell lymphoma/leukemia (HTLV-1+)    
14q32 t(14;14)(q11;q32) Adult T-cell lymphoma/leukemia (HTLV-1+)   TRA+
21q21 t(9;21)(p24;q21) Adult T-cell lymphoma/leukemia (HTLV-1+)    

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p11 add(1)(p11) Adult T-cell lymphoma/leukemia (HTLV-1+)    
1p12 add(1)(p12) Adult T-cell lymphoma/leukemia (HTLV-1+)    
1p13 add(1)(p13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
1p31 del(1)(p31) Adult T-cell lymphoma/leukemia (HTLV-1+)    
1p32 del(1)(p32) Adult T-cell lymphoma/leukemia (HTLV-1+)    
1p34 del(1)(p34) Adult T-cell lymphoma/leukemia (HTLV-1+)    
1p35 add(1)(p35) Adult T-cell lymphoma/leukemia (HTLV-1+)    
1p36 add(1)(p36) Adult T-cell lymphoma/leukemia (HTLV-1+)    
1q10 add(1)(q10) Adult T-cell lymphoma/leukemia (HTLV-1+)    
1q21 add(1)(q21) Adult T-cell lymphoma/leukemia (HTLV-1+)    
1q21 dup(1)(q21q32) Adult T-cell lymphoma/leukemia (HTLV-1+)    
1q21 dup(1)(q21q42) Adult T-cell lymphoma/leukemia (HTLV-1+)    
1q23 add(1)(q23) Adult T-cell lymphoma/leukemia (HTLV-1+)    
1q32 add(1)(q32) Adult T-cell lymphoma/leukemia (HTLV-1+)    
1q32 del(1)(q32) Adult T-cell lymphoma/leukemia (HTLV-1+)    
1q32 dup(1)(q21q32) Adult T-cell lymphoma/leukemia (HTLV-1+)    
1q42 add(1)(q42) Adult T-cell lymphoma/leukemia (HTLV-1+)    
1q42 dup(1)(q21q42) Adult T-cell lymphoma/leukemia (HTLV-1+)    
2p25 add(2)(p25) Adult T-cell lymphoma/leukemia (HTLV-1+)    
2q21 del(2)(q21) Adult T-cell lymphoma/leukemia (HTLV-1+)    
2q31 add(2)(q31) Adult T-cell lymphoma/leukemia (HTLV-1+)    
2q33 add(2)(q33) Adult T-cell lymphoma/leukemia (HTLV-1+)    
2q33 del(2)(q33) Adult T-cell lymphoma/leukemia (HTLV-1+)    
2q37 add(2)(q37) Adult T-cell lymphoma/leukemia (HTLV-1+)    
3p13 add(3)(p13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
3p21 add(3)(p21) Adult T-cell lymphoma/leukemia (HTLV-1+)    
3p21 del(3)(p21) Adult T-cell lymphoma/leukemia (HTLV-1+)    
3p25 add(3)(p25) Adult T-cell lymphoma/leukemia (HTLV-1+)    
3q12 add(3)(q12) Adult T-cell lymphoma/leukemia (HTLV-1+)    
3q12 del(3)(q12) Adult T-cell lymphoma/leukemia (HTLV-1+)    
3q13 del(3)(q13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
3q21 add(3)(q21) Adult T-cell lymphoma/leukemia (HTLV-1+)    
3q21 del(3)(q21) Adult T-cell lymphoma/leukemia (HTLV-1+)    
3q21 del(3)(q21q25) Adult T-cell lymphoma/leukemia (HTLV-1+)    
3q22 add(3)(q22) Adult T-cell lymphoma/leukemia (HTLV-1+)    
3q23 del(3)(q23) Adult T-cell lymphoma/leukemia (HTLV-1+)    
3q25 add(3)(q25) Adult T-cell lymphoma/leukemia (HTLV-1+)    
3q25 del(3)(q21q25) Adult T-cell lymphoma/leukemia (HTLV-1+)    
3q27 add(3)(q27) Adult T-cell lymphoma/leukemia (HTLV-1+)    
3q27 del(3)(q27) Adult T-cell lymphoma/leukemia (HTLV-1+)    
3q29 add(3)(q29) Adult T-cell lymphoma/leukemia (HTLV-1+)    
4p16 add(4)(p16) Adult T-cell lymphoma/leukemia (HTLV-1+)    
4q21 del(4)(q21) Adult T-cell lymphoma/leukemia (HTLV-1+)    
4q21 dup(4)(q21q31) Adult T-cell lymphoma/leukemia (HTLV-1+)    
4q25 del(4)(q25q31) Adult T-cell lymphoma/leukemia (HTLV-1+)    
4q31 add(4)(q31) Adult T-cell lymphoma/leukemia (HTLV-1+)    
4q31 del(4)(q25q31) Adult T-cell lymphoma/leukemia (HTLV-1+)    
4q31 dup(4)(q21q31) Adult T-cell lymphoma/leukemia (HTLV-1+)    
5p13 del(5)(p13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
5q13 del(5)(q13q22) Adult T-cell lymphoma/leukemia (HTLV-1+)    
5q15 del(5)(q15q31) Adult T-cell lymphoma/leukemia (HTLV-1+)    
5q22 del(5)(q13q22) Adult T-cell lymphoma/leukemia (HTLV-1+)    
5q31 add(5)(q31) Adult T-cell lymphoma/leukemia (HTLV-1+)    
5q31 del(5)(q15q31) Adult T-cell lymphoma/leukemia (HTLV-1+)    
6p10 i(6)(p10) Adult T-cell lymphoma/leukemia (HTLV-1+)    
6p21 del(6)(p21) Adult T-cell lymphoma/leukemia (HTLV-1+)    
6p23 add(6)(p23) Adult T-cell lymphoma/leukemia (HTLV-1+)    
6p23 del(6)(p23) Adult T-cell lymphoma/leukemia (HTLV-1+)    
6p25 add(6)(p25) Adult T-cell lymphoma/leukemia (HTLV-1+)    
6q13 del(6)(q13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
6q15 del(6)(q15) Adult T-cell lymphoma/leukemia (HTLV-1+)    
6q15 del(6)(q15q21) Adult T-cell lymphoma/leukemia (HTLV-1+)   11   
6q21 del(6)(q15q21) Adult T-cell lymphoma/leukemia (HTLV-1+)   11   
6q21 del(6)(q21) Adult T-cell lymphoma/leukemia (HTLV-1+)   10   
6q21 del(6)(q21q23) Adult T-cell lymphoma/leukemia (HTLV-1+)    
6q21 del(6)(q21q25) Adult T-cell lymphoma/leukemia (HTLV-1+)    
6q22 del(6)(q22) Adult T-cell lymphoma/leukemia (HTLV-1+)    
6q23 del(6)(q21q23) Adult T-cell lymphoma/leukemia (HTLV-1+)    
6q23 del(6)(q23) Adult T-cell lymphoma/leukemia (HTLV-1+)    
6q25 del(6)(q21q25) Adult T-cell lymphoma/leukemia (HTLV-1+)    
7p13 del(7)(p13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
7p14 del(7)(p14) Adult T-cell lymphoma/leukemia (HTLV-1+)    
7p15 del(7)(p15) Adult T-cell lymphoma/leukemia (HTLV-1+)    
7p22 add(7)(p22) Adult T-cell lymphoma/leukemia (HTLV-1+)    
7q10 i(7)(q10) Adult T-cell lymphoma/leukemia (HTLV-1+)    
7q11 der(16)t(7;16)(q11;q24) Adult T-cell lymphoma/leukemia (HTLV-1+)    
7q11 dup(7)(q11q22) Adult T-cell lymphoma/leukemia (HTLV-1+)    
7q22 add(7)(q22) Adult T-cell lymphoma/leukemia (HTLV-1+)    
7q22 del(7)(q22q32) Adult T-cell lymphoma/leukemia (HTLV-1+)    
7q22 dup(7)(q11q22) Adult T-cell lymphoma/leukemia (HTLV-1+)    
7q32 add(7)(q32) Adult T-cell lymphoma/leukemia (HTLV-1+)    
7q32 del(7)(q22q32) Adult T-cell lymphoma/leukemia (HTLV-1+)    
7q36 add(7)(q36) Adult T-cell lymphoma/leukemia (HTLV-1+)    
8p21 del(8)(p21) Adult T-cell lymphoma/leukemia (HTLV-1+)    
8p23 add(8)(p23) Adult T-cell lymphoma/leukemia (HTLV-1+)    
8q10 i(8)(q10) Adult T-cell lymphoma/leukemia (HTLV-1+)    
8q11 dup(8)(q11q24) Adult T-cell lymphoma/leukemia (HTLV-1+)    
8q22 del(8)(q22) Adult T-cell lymphoma/leukemia (HTLV-1+)    
8q24 add(8)(q24) Adult T-cell lymphoma/leukemia (HTLV-1+)    
8q24 dup(8)(q11q24) Adult T-cell lymphoma/leukemia (HTLV-1+)    
9p13 del(9)(p13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
9p22 add(9)(p22) Adult T-cell lymphoma/leukemia (HTLV-1+)    
9p22 del(9)(p22) Adult T-cell lymphoma/leukemia (HTLV-1+)    
9q13 del(9)(q13q22) Adult T-cell lymphoma/leukemia (HTLV-1+)    
9q22 del(9)(q13q22) Adult T-cell lymphoma/leukemia (HTLV-1+)    
9q22 del(9)(q22) Adult T-cell lymphoma/leukemia (HTLV-1+)    
9q34 add(9)(q34) Adult T-cell lymphoma/leukemia (HTLV-1+)    
10p11 del(10)(p11) Adult T-cell lymphoma/leukemia (HTLV-1+)    
10p11 del(10)(p11p13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
10p12 del(10)(p12) Adult T-cell lymphoma/leukemia (HTLV-1+)    

Band Abnormality Morphology Topography Cases Genes
10p13 del(10)(p11p13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
10p13 del(10)(p13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
10p14 del(10)(p14) Adult T-cell lymphoma/leukemia (HTLV-1+)    
10q23 del(10)(q23) Adult T-cell lymphoma/leukemia (HTLV-1+)    
10q24 add(10)(q24) Adult T-cell lymphoma/leukemia (HTLV-1+)    
10q24 del(10)(q24) Adult T-cell lymphoma/leukemia (HTLV-1+)    
10q26 add(10)(q26) Adult T-cell lymphoma/leukemia (HTLV-1+)    
11p11 add(11)(p11) Adult T-cell lymphoma/leukemia (HTLV-1+)    
11p15 add(11)(p15) Adult T-cell lymphoma/leukemia (HTLV-1+)    
11q13 del(11)(q13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
11q13 dup(11)(q13q23) Adult T-cell lymphoma/leukemia (HTLV-1+)    
11q23 add(11)(q23) Adult T-cell lymphoma/leukemia (HTLV-1+)    
11q23 del(11)(q23) Adult T-cell lymphoma/leukemia (HTLV-1+)    
11q23 dup(11)(q13q23) Adult T-cell lymphoma/leukemia (HTLV-1+)    
11q25 add(11)(q25) Adult T-cell lymphoma/leukemia (HTLV-1+)    
12p11 del(12)(p11) Adult T-cell lymphoma/leukemia (HTLV-1+)    
12p13 add(12)(p13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
12q24 add(12)(q24) Adult T-cell lymphoma/leukemia (HTLV-1+)    
13p13 add(13)(p13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
13q14 del(13)(q14) Adult T-cell lymphoma/leukemia (HTLV-1+)    
13q22 del(13)(q22q32) Adult T-cell lymphoma/leukemia (HTLV-1+)    
13q32 del(13)(q22q32) Adult T-cell lymphoma/leukemia (HTLV-1+)    
13q32 del(13)(q32) Adult T-cell lymphoma/leukemia (HTLV-1+)    
13q34 add(13)(q34) Adult T-cell lymphoma/leukemia (HTLV-1+)    
14p11 add(14)(p11) Adult T-cell lymphoma/leukemia (HTLV-1+)    
14p12 add(14)(p12) Adult T-cell lymphoma/leukemia (HTLV-1+)    
14q10 i(14)(q10) Adult T-cell lymphoma/leukemia (HTLV-1+)    
14q11 del(14)(q11) Adult T-cell lymphoma/leukemia (HTLV-1+)   TRA+
14q11 del(14)(q11q13) Adult T-cell lymphoma/leukemia (HTLV-1+)   TRA+
14q13 del(14)(q11q13) Adult T-cell lymphoma/leukemia (HTLV-1+)   TRA+
14q24 add(14)(q24) Adult T-cell lymphoma/leukemia (HTLV-1+)    
14q32 add(14)(q32) Adult T-cell lymphoma/leukemia (HTLV-1+)   22   
15p11 add(15)(p11) Adult T-cell lymphoma/leukemia (HTLV-1+)    
16p13 add(16)(p13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
16q24 der(16)t(7;16)(q11;q24) Adult T-cell lymphoma/leukemia (HTLV-1+)    
17p11 add(17)(p11) Adult T-cell lymphoma/leukemia (HTLV-1+)    
17p13 add(17)(p13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
17q10 i(17)(q10) Adult T-cell lymphoma/leukemia (HTLV-1+)    
17q23 del(17)(q23) Adult T-cell lymphoma/leukemia (HTLV-1+)    
17q25 add(17)(q25) Adult T-cell lymphoma/leukemia (HTLV-1+)    
18p11 add(18)(p11) Adult T-cell lymphoma/leukemia (HTLV-1+)   13   
18q10 i(18)(q10) Adult T-cell lymphoma/leukemia (HTLV-1+)    
19p13 add(19)(p13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
19q13 add(19)(q13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
20p13 add(20)(p13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
20q11 del(20)(q11) Adult T-cell lymphoma/leukemia (HTLV-1+)    
20q13 add(20)(q13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
21p11 add(21)(p11) Adult T-cell lymphoma/leukemia (HTLV-1+)    
21q10 i(21)(q10) Adult T-cell lymphoma/leukemia (HTLV-1+)    
21q22 add(21)(q22) Adult T-cell lymphoma/leukemia (HTLV-1+)    
22q13 add(22)(q13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
Xp22 add(X)(p22) Adult T-cell lymphoma/leukemia (HTLV-1+)    

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+2 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+3 Adult T-cell lymphoma/leukemia (HTLV-1+)   54   
+4 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+5 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+6 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+7 Adult T-cell lymphoma/leukemia (HTLV-1+)   26   
+8 Adult T-cell lymphoma/leukemia (HTLV-1+)   19   
+9 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+10 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+11 Adult T-cell lymphoma/leukemia (HTLV-1+)   11   
+12 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+13 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+14 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+15 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+16 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+17 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+18 Adult T-cell lymphoma/leukemia (HTLV-1+)   12   
+19 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+20 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+21 Adult T-cell lymphoma/leukemia (HTLV-1+)   24   
+22 Adult T-cell lymphoma/leukemia (HTLV-1+)    
+X Adult T-cell lymphoma/leukemia (HTLV-1+)    

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Adult T-cell lymphoma/leukemia (HTLV-1+)    
-2 Adult T-cell lymphoma/leukemia (HTLV-1+)    
-3 Adult T-cell lymphoma/leukemia (HTLV-1+)    
-4 Adult T-cell lymphoma/leukemia (HTLV-1+)   24   
-5 Adult T-cell lymphoma/leukemia (HTLV-1+)   16   
-6 Adult T-cell lymphoma/leukemia (HTLV-1+)   15   
-7 Adult T-cell lymphoma/leukemia (HTLV-1+)    
-8 Adult T-cell lymphoma/leukemia (HTLV-1+)   11   
-9 Adult T-cell lymphoma/leukemia (HTLV-1+)   20   
-10 Adult T-cell lymphoma/leukemia (HTLV-1+)   24   
-11 Adult T-cell lymphoma/leukemia (HTLV-1+)    
-12 Adult T-cell lymphoma/leukemia (HTLV-1+)   20   
-13 Adult T-cell lymphoma/leukemia (HTLV-1+)   19   
-14 Adult T-cell lymphoma/leukemia (HTLV-1+)   25   
-15 Adult T-cell lymphoma/leukemia (HTLV-1+)   15   
-16 Adult T-cell lymphoma/leukemia (HTLV-1+)   20   
-17 Adult T-cell lymphoma/leukemia (HTLV-1+)   24   
-18 Adult T-cell lymphoma/leukemia (HTLV-1+)   15   
-19 Adult T-cell lymphoma/leukemia (HTLV-1+)   18   
-20 Adult T-cell lymphoma/leukemia (HTLV-1+)    
-21 Adult T-cell lymphoma/leukemia (HTLV-1+)   14   
-22 Adult T-cell lymphoma/leukemia (HTLV-1+)   20   
-X Adult T-cell lymphoma/leukemia (HTLV-1+)   33   
-Y Adult T-cell lymphoma/leukemia (HTLV-1+)   31