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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




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[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p11 t(1;9)(p11;q11) Anaplastic large cell lymphoma, systemic type    
1q25 t(1;2)(q25;p23) Anaplastic large cell lymphoma, systemic type    
2p23 t(1;2)(q25;p23) Anaplastic large cell lymphoma, systemic type    
2p23 t(2;5)(p23;q35) Anaplastic large cell lymphoma, systemic type   69  NPM1/ALK
4p16 t(4;7)(p16;p13) Anaplastic large cell lymphoma, systemic type    
5q35 t(2;5)(p23;q35) Anaplastic large cell lymphoma, systemic type   69  NPM1/ALK
7p13 t(4;7)(p16;p13) Anaplastic large cell lymphoma, systemic type    
9q11 t(1;9)(p11;q11) Anaplastic large cell lymphoma, systemic type    

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p32 add(1)(p32) Anaplastic large cell lymphoma, systemic type    
1p32 del(1)(p32) Anaplastic large cell lymphoma, systemic type    
1p36 add(1)(p36) Anaplastic large cell lymphoma, systemic type    
1q10 i(1)(q10) Anaplastic large cell lymphoma, systemic type    
1q12 der(13)t(1;13)(q12;p11) Anaplastic large cell lymphoma, systemic type    
1q21 dup(1)(q21q44) Anaplastic large cell lymphoma, systemic type    
1q44 dup(1)(q21q44) Anaplastic large cell lymphoma, systemic type    
2p11 add(2)(p11) Anaplastic large cell lymphoma, systemic type    
2p23 add(2)(p23) Anaplastic large cell lymphoma, systemic type    
2p23 ider(2)(q10)inv(2)(p23q35) Anaplastic large cell lymphoma, systemic type    
2q10 ider(2)(q10)inv(2)(p23q35) Anaplastic large cell lymphoma, systemic type    
2q35 ider(2)(q10)inv(2)(p23q35) Anaplastic large cell lymphoma, systemic type    
2q37 add(2)(q37) Anaplastic large cell lymphoma, systemic type    
5p15 add(5)(p15) Anaplastic large cell lymphoma, systemic type    
5q35 add(5)(q35) Anaplastic large cell lymphoma, systemic type    
6p25 add(6)(p25) Anaplastic large cell lymphoma, systemic type    
6q15 del(6)(q15) Anaplastic large cell lymphoma, systemic type    
6q21 del(6)(q21) Anaplastic large cell lymphoma, systemic type    
6q23 del(6)(q23) Anaplastic large cell lymphoma, systemic type    
8q10 i(8)(q10) Anaplastic large cell lymphoma, systemic type    
8q24 add(8)(q24) Anaplastic large cell lymphoma, systemic type    
9p24 hsr(9)(p24) Anaplastic large cell lymphoma, systemic type    
9q13 del(9)(q13) Anaplastic large cell lymphoma, systemic type    
11p11 del(11)(p11) Anaplastic large cell lymphoma, systemic type    
11p13 del(11)(p13) Anaplastic large cell lymphoma, systemic type    
11q21 del(11)(q21q23) Anaplastic large cell lymphoma, systemic type    
11q23 del(11)(q21q23) Anaplastic large cell lymphoma, systemic type    
12p13 del(12)(p13) Anaplastic large cell lymphoma, systemic type    
13p11 add(13)(p11) Anaplastic large cell lymphoma, systemic type    
13p11 der(13)t(1;13)(q12;p11) Anaplastic large cell lymphoma, systemic type    
13q34 add(13)(q34) Anaplastic large cell lymphoma, systemic type    
14p11 add(14)(p11) Anaplastic large cell lymphoma, systemic type    
14q11 der(19)t(14;19)(q11;p11) Anaplastic large cell lymphoma, systemic type    
15p11 add(15)(p11) Anaplastic large cell lymphoma, systemic type    
15q24 add(15)(q24) Anaplastic large cell lymphoma, systemic type    
15q26 add(15)(q26) Anaplastic large cell lymphoma, systemic type    
16p13 add(16)(p13) Anaplastic large cell lymphoma, systemic type    
16p13 der(16)add(16)(p13)add(16)(q24) Anaplastic large cell lymphoma, systemic type    
16q22 add(16)(q22) Anaplastic large cell lymphoma, systemic type    
16q24 der(16)add(16)(p13)add(16)(q24) Anaplastic large cell lymphoma, systemic type    
17p11 add(17)(p11) Anaplastic large cell lymphoma, systemic type    
17p11 del(17)(p11) Anaplastic large cell lymphoma, systemic type    
17p13 add(17)(p13) Anaplastic large cell lymphoma, systemic type    
17q10 i(17)(q10) Anaplastic large cell lymphoma, systemic type    
18q23 add(18)(q23) Anaplastic large cell lymphoma, systemic type    
19p11 der(19)t(14;19)(q11;p11) Anaplastic large cell lymphoma, systemic type    
19p13 add(19)(p13) Anaplastic large cell lymphoma, systemic type    
19q13 add(19)(q13) Anaplastic large cell lymphoma, systemic type    
22q13 add(22)(q13) Anaplastic large cell lymphoma, systemic type    

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Anaplastic large cell lymphoma, systemic type    
+2 Anaplastic large cell lymphoma, systemic type    
+3 Anaplastic large cell lymphoma, systemic type    
+5 Anaplastic large cell lymphoma, systemic type   13   
+6 Anaplastic large cell lymphoma, systemic type    
+7 Anaplastic large cell lymphoma, systemic type   25   
+8 Anaplastic large cell lymphoma, systemic type    
+9 Anaplastic large cell lymphoma, systemic type    
+10 Anaplastic large cell lymphoma, systemic type    
+11 Anaplastic large cell lymphoma, systemic type    
+12 Anaplastic large cell lymphoma, systemic type    
+15 Anaplastic large cell lymphoma, systemic type    
+16 Anaplastic large cell lymphoma, systemic type    
+17 Anaplastic large cell lymphoma, systemic type    
+18 Anaplastic large cell lymphoma, systemic type    
+19 Anaplastic large cell lymphoma, systemic type    
+20 Anaplastic large cell lymphoma, systemic type    
+21 Anaplastic large cell lymphoma, systemic type    
+22 Anaplastic large cell lymphoma, systemic type    
+X Anaplastic large cell lymphoma, systemic type   12   
+Y Anaplastic large cell lymphoma, systemic type    

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-2 Anaplastic large cell lymphoma, systemic type    
-4 Anaplastic large cell lymphoma, systemic type    
-6 Anaplastic large cell lymphoma, systemic type    
-8 Anaplastic large cell lymphoma, systemic type    
-9 Anaplastic large cell lymphoma, systemic type    
-10 Anaplastic large cell lymphoma, systemic type   10   
-11 Anaplastic large cell lymphoma, systemic type    
-13 Anaplastic large cell lymphoma, systemic type    
-14 Anaplastic large cell lymphoma, systemic type    
-15 Anaplastic large cell lymphoma, systemic type    
-16 Anaplastic large cell lymphoma, systemic type    
-17 Anaplastic large cell lymphoma, systemic type    
-18 Anaplastic large cell lymphoma, systemic type    
-19 Anaplastic large cell lymphoma, systemic type    
-20 Anaplastic large cell lymphoma, systemic type    
-21 Anaplastic large cell lymphoma, systemic type    
-22 Anaplastic large cell lymphoma, systemic type    
-X Anaplastic large cell lymphoma, systemic type    
-Y Anaplastic large cell lymphoma, systemic type   17