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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

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[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
2p23 t(2;5)(p23;q35) Peripheral T-cell lymphoma, unspecified   NPM1/ALK
5q35 t(2;5)(p23;q35) Peripheral T-cell lymphoma, unspecified   NPM1/ALK
6p25 t(6;14)(p25;q11) Peripheral T-cell lymphoma, unspecified   TRA/IRF4
14q11 t(14;19)(q11;q13) Peripheral T-cell lymphoma, unspecified   TRA/PVRL2
14q11 t(6;14)(p25;q11) Peripheral T-cell lymphoma, unspecified   TRA/IRF4
19q13 t(14;19)(q11;q13) Peripheral T-cell lymphoma, unspecified   TRA/PVRL2

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p13 del(1)(p13) Peripheral T-cell lymphoma, unspecified    
1p36 add(1)(p36) Peripheral T-cell lymphoma, unspecified    
1q10 i(1)(q10) Peripheral T-cell lymphoma, unspecified    
1q11 add(1)(q11) Peripheral T-cell lymphoma, unspecified    
1q12 dup(1)(q12q32) Peripheral T-cell lymphoma, unspecified    
1q25 dup(1)(q25q44) Peripheral T-cell lymphoma, unspecified    
1q32 dup(1)(q12q32) Peripheral T-cell lymphoma, unspecified    
1q44 dup(1)(q25q44) Peripheral T-cell lymphoma, unspecified    
2p13 add(2)(p13) Peripheral T-cell lymphoma, unspecified    
2p23 del(2)(p23) Peripheral T-cell lymphoma, unspecified    
2q37 add(2)(q37) Peripheral T-cell lymphoma, unspecified    
3p11 add(3)(p11) Peripheral T-cell lymphoma, unspecified    
3p13 add(3)(p13) Peripheral T-cell lymphoma, unspecified    
3p14 del(3)(p14) Peripheral T-cell lymphoma, unspecified    
3q27 add(3)(q27) Peripheral T-cell lymphoma, unspecified    
4q21 add(4)(q21) Peripheral T-cell lymphoma, unspecified    
4q35 add(4)(q35) Peripheral T-cell lymphoma, unspecified    
5p10 i(5)(p10) Peripheral T-cell lymphoma, unspecified    
5q13 der(7)t(5;7)(q13;q36) Peripheral T-cell lymphoma, unspecified    
5q35 add(5)(q35) Peripheral T-cell lymphoma, unspecified    
6p23 add(6)(p23) Peripheral T-cell lymphoma, unspecified    
6q15 del(6)(q15q25) Peripheral T-cell lymphoma, unspecified    
6q16 del(6)(q16q22) Peripheral T-cell lymphoma, unspecified    
6q16 del(6)(q16q26) Peripheral T-cell lymphoma, unspecified    
6q21 del(6)(q21q25) Peripheral T-cell lymphoma, unspecified    
6q22 del(6)(q16q22) Peripheral T-cell lymphoma, unspecified    
6q24 add(6)(q24) Peripheral T-cell lymphoma, unspecified    
6q25 del(6)(q15q25) Peripheral T-cell lymphoma, unspecified    
6q25 del(6)(q21q25) Peripheral T-cell lymphoma, unspecified    
6q26 del(6)(q16q26) Peripheral T-cell lymphoma, unspecified    
7q10 i(7)(q10) Peripheral T-cell lymphoma, unspecified    
7q31 del(7)(q31) Peripheral T-cell lymphoma, unspecified    
7q36 der(7)t(5;7)(q13;q36) Peripheral T-cell lymphoma, unspecified    
8q10 i(8)(q10) Peripheral T-cell lymphoma, unspecified    
8q24 add(8)(q24) Peripheral T-cell lymphoma, unspecified    
9p21 del(9)(p21) Peripheral T-cell lymphoma, unspecified    
9p24 add(9)(p24) Peripheral T-cell lymphoma, unspecified    
9q21 del(9)(q21q34) Peripheral T-cell lymphoma, unspecified    
9q22 del(9)(q22q34) Peripheral T-cell lymphoma, unspecified    
9q34 add(9)(q34) Peripheral T-cell lymphoma, unspecified    
9q34 del(9)(q21q34) Peripheral T-cell lymphoma, unspecified    
9q34 del(9)(q22q34) Peripheral T-cell lymphoma, unspecified    
10p11 add(10)(p11) Peripheral T-cell lymphoma, unspecified    
10p11 del(10)(p11) Peripheral T-cell lymphoma, unspecified    
10p13 del(10)(p13) Peripheral T-cell lymphoma, unspecified    
10p15 add(10)(p15) Peripheral T-cell lymphoma, unspecified    
10q24 add(10)(q24) Peripheral T-cell lymphoma, unspecified    
11q13 del(11)(q13) Peripheral T-cell lymphoma, unspecified    
11q23 add(11)(q23) Peripheral T-cell lymphoma, unspecified    
12p11 der(12)t(12;17)(p11;q11) Peripheral T-cell lymphoma, unspecified    
12p13 add(12)(p13) Peripheral T-cell lymphoma, unspecified    
12q24 add(12)(q24) Peripheral T-cell lymphoma, unspecified    
13p11 add(13)(p11) Peripheral T-cell lymphoma, unspecified    
13q12 del(13)(q12q14) Peripheral T-cell lymphoma, unspecified    
13q14 del(13)(q12q14) Peripheral T-cell lymphoma, unspecified    
13q32 add(13)(q32) Peripheral T-cell lymphoma, unspecified    
13q34 add(13)(q34) Peripheral T-cell lymphoma, unspecified    
14p11 add(14)(p11) Peripheral T-cell lymphoma, unspecified    
14q32 add(14)(q32) Peripheral T-cell lymphoma, unspecified    
15p11 add(15)(p11) Peripheral T-cell lymphoma, unspecified    
16p13 add(16)(p13) Peripheral T-cell lymphoma, unspecified    
16q23 add(16)(q23) Peripheral T-cell lymphoma, unspecified    
16q24 add(16)(q24) Peripheral T-cell lymphoma, unspecified    
17p12 add(17)(p12) Peripheral T-cell lymphoma, unspecified    
17p12 del(17)(p12) Peripheral T-cell lymphoma, unspecified    
17p13 add(17)(p13) Peripheral T-cell lymphoma, unspecified    
17q10 i(17)(q10) Peripheral T-cell lymphoma, unspecified    
17q11 der(12)t(12;17)(p11;q11) Peripheral T-cell lymphoma, unspecified    
17q25 add(17)(q25) Peripheral T-cell lymphoma, unspecified    
18p11 add(18)(p11) Peripheral T-cell lymphoma, unspecified    
19q13 add(19)(q13) Peripheral T-cell lymphoma, unspecified    
20q11 del(20)(q11q13) Peripheral T-cell lymphoma, unspecified    
20q13 del(20)(q11q13) Peripheral T-cell lymphoma, unspecified    
21p13 add(21)(p13) Peripheral T-cell lymphoma, unspecified    
21q10 i(21)(q10) Peripheral T-cell lymphoma, unspecified    
21q22 add(21)(q22) Peripheral T-cell lymphoma, unspecified    
22q11 add(22)(q11) Peripheral T-cell lymphoma, unspecified    
22q11 del(22)(q11) Peripheral T-cell lymphoma, unspecified    
22q13 add(22)(q13) Peripheral T-cell lymphoma, unspecified    
Xp22 add(X)(p22) Peripheral T-cell lymphoma, unspecified    

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Peripheral T-cell lymphoma, unspecified    
+2 Peripheral T-cell lymphoma, unspecified    
+3 Peripheral T-cell lymphoma, unspecified   23   
+4 Peripheral T-cell lymphoma, unspecified   12   
+5 Peripheral T-cell lymphoma, unspecified   28   
+6 Peripheral T-cell lymphoma, unspecified    
+7 Peripheral T-cell lymphoma, unspecified   25   
+8 Peripheral T-cell lymphoma, unspecified   14   
+9 Peripheral T-cell lymphoma, unspecified   16   
+10 Peripheral T-cell lymphoma, unspecified    
+11 Peripheral T-cell lymphoma, unspecified    
+12 Peripheral T-cell lymphoma, unspecified   12   
+13 Peripheral T-cell lymphoma, unspecified    
+14 Peripheral T-cell lymphoma, unspecified   10   
+15 Peripheral T-cell lymphoma, unspecified    
+16 Peripheral T-cell lymphoma, unspecified    
+17 Peripheral T-cell lymphoma, unspecified    
+18 Peripheral T-cell lymphoma, unspecified   13   
+19 Peripheral T-cell lymphoma, unspecified   18   
+20 Peripheral T-cell lymphoma, unspecified    
+21 Peripheral T-cell lymphoma, unspecified   25   
+22 Peripheral T-cell lymphoma, unspecified    
+X Peripheral T-cell lymphoma, unspecified   14   
+Y Peripheral T-cell lymphoma, unspecified    

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Peripheral T-cell lymphoma, unspecified    
-2 Peripheral T-cell lymphoma, unspecified    
-3 Peripheral T-cell lymphoma, unspecified    
-4 Peripheral T-cell lymphoma, unspecified   17   
-5 Peripheral T-cell lymphoma, unspecified    
-6 Peripheral T-cell lymphoma, unspecified   15   
-7 Peripheral T-cell lymphoma, unspecified    
-8 Peripheral T-cell lymphoma, unspecified   12   
-9 Peripheral T-cell lymphoma, unspecified   13   
-10 Peripheral T-cell lymphoma, unspecified   26   
-11 Peripheral T-cell lymphoma, unspecified    
-12 Peripheral T-cell lymphoma, unspecified   15   
-13 Peripheral T-cell lymphoma, unspecified   23   
-14 Peripheral T-cell lymphoma, unspecified   18   
-15 Peripheral T-cell lymphoma, unspecified   11   
-16 Peripheral T-cell lymphoma, unspecified    
-17 Peripheral T-cell lymphoma, unspecified   16   
-18 Peripheral T-cell lymphoma, unspecified   10   
-19 Peripheral T-cell lymphoma, unspecified   14   
-20 Peripheral T-cell lymphoma, unspecified    
-21 Peripheral T-cell lymphoma, unspecified    
-22 Peripheral T-cell lymphoma, unspecified   14   
-X Peripheral T-cell lymphoma, unspecified   20   
-Y Peripheral T-cell lymphoma, unspecified   31