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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

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[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
6p22 inv(6)(p22q12) Mycosis fungoides/Sezary syndrome    
6q12 inv(6)(p22q12) Mycosis fungoides/Sezary syndrome    
8p11 t(8;17)(p11;q11) Mycosis fungoides/Sezary syndrome    
14q11 inv(14)(q11q32) Mycosis fungoides/Sezary syndrome    
14q32 inv(14)(q11q32) Mycosis fungoides/Sezary syndrome    
17q11 t(8;17)(p11;q11) Mycosis fungoides/Sezary syndrome    

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p11 add(1)(p11) Mycosis fungoides/Sezary syndrome    
1p36 add(1)(p36) Mycosis fungoides/Sezary syndrome    
1p36 der(8)t(1;8)(p36;q24) Mycosis fungoides/Sezary syndrome    
1q11 add(1)(q11) Mycosis fungoides/Sezary syndrome    
1q11 del(1)(q11) Mycosis fungoides/Sezary syndrome    
1q32 del(1)(q32) Mycosis fungoides/Sezary syndrome    
2p21 del(2)(p21) Mycosis fungoides/Sezary syndrome    
2p23 add(2)(p23) Mycosis fungoides/Sezary syndrome    
2q34 del(2)(q34) Mycosis fungoides/Sezary syndrome    
2q37 add(2)(q37) Mycosis fungoides/Sezary syndrome    
3p11 del(3)(p11) Mycosis fungoides/Sezary syndrome    
3p12 add(3)(p12) Mycosis fungoides/Sezary syndrome    
3p14 del(3)(p14) Mycosis fungoides/Sezary syndrome    
3p21 der(22)t(3;22)(p21;q13) Mycosis fungoides/Sezary syndrome    
5q13 del(5)(q13) Mycosis fungoides/Sezary syndrome    
5q13 del(5)(q13q33) Mycosis fungoides/Sezary syndrome    
5q31 add(5)(q31) Mycosis fungoides/Sezary syndrome    
5q33 del(5)(q13q33) Mycosis fungoides/Sezary syndrome    
6p25 der(6)add(6)(p25)add(6)(q27) Mycosis fungoides/Sezary syndrome    
6q21 del(6)(q21) Mycosis fungoides/Sezary syndrome    
6q23 del(6)(q23) Mycosis fungoides/Sezary syndrome    
6q27 der(6)add(6)(p25)add(6)(q27) Mycosis fungoides/Sezary syndrome    
7p13 del(7)(p13) Mycosis fungoides/Sezary syndrome    
7p22 add(7)(p22) Mycosis fungoides/Sezary syndrome    
7q11 add(7)(q11) Mycosis fungoides/Sezary syndrome    
7q32 add(7)(q32) Mycosis fungoides/Sezary syndrome    
7q36 add(7)(q36) Mycosis fungoides/Sezary syndrome    
8q10 i(8)(q10) Mycosis fungoides/Sezary syndrome    
8q24 der(8)t(1;8)(p36;q24) Mycosis fungoides/Sezary syndrome    
9p21 del(9)(p21) Mycosis fungoides/Sezary syndrome    
9p22 add(9)(p22) Mycosis fungoides/Sezary syndrome    
9q13 del(9)(q13q22) Mycosis fungoides/Sezary syndrome    
9q22 del(9)(q13q22) Mycosis fungoides/Sezary syndrome    
9q31 der(15)t(9;15)(q31;q22) Mycosis fungoides/Sezary syndrome    
9q34 add(9)(q34) Mycosis fungoides/Sezary syndrome    
10p11 del(10)(p11p15) Mycosis fungoides/Sezary syndrome    
10p13 del(10)(p13) Mycosis fungoides/Sezary syndrome    
10p15 del(10)(p11p15) Mycosis fungoides/Sezary syndrome    
10q11 der(11)t(10;11)(q11;p11) Mycosis fungoides/Sezary syndrome    
10q22 add(10)(q22) Mycosis fungoides/Sezary syndrome    
10q24 del(10)(q24) Mycosis fungoides/Sezary syndrome   NFKB2+
10q26 add(10)(q26) Mycosis fungoides/Sezary syndrome    
11p11 der(11)t(10;11)(q11;p11) Mycosis fungoides/Sezary syndrome    
11p15 add(11)(p15) Mycosis fungoides/Sezary syndrome    
11q21 add(11)(q21) Mycosis fungoides/Sezary syndrome    
11q21 del(11)(q21) Mycosis fungoides/Sezary syndrome    
11q23 add(11)(q23) Mycosis fungoides/Sezary syndrome    
11q24 add(11)(q24) Mycosis fungoides/Sezary syndrome    
12p11 add(12)(p11) Mycosis fungoides/Sezary syndrome    
12p13 add(12)(p13) Mycosis fungoides/Sezary syndrome    
12p13 del(12)(p13) Mycosis fungoides/Sezary syndrome    
13p11 add(13)(p11) Mycosis fungoides/Sezary syndrome    
13q12 del(13)(q12q14) Mycosis fungoides/Sezary syndrome    
13q14 del(13)(q12q14) Mycosis fungoides/Sezary syndrome    
13q14 del(13)(q14q22) Mycosis fungoides/Sezary syndrome    
13q22 del(13)(q14q22) Mycosis fungoides/Sezary syndrome    
13q34 add(13)(q34) Mycosis fungoides/Sezary syndrome    
14p11 add(14)(p11) Mycosis fungoides/Sezary syndrome    
14q32 add(14)(q32) Mycosis fungoides/Sezary syndrome    
15q15 del(15)(q15) Mycosis fungoides/Sezary syndrome    
15q22 del(15)(q22q26) Mycosis fungoides/Sezary syndrome    
15q22 der(15)t(9;15)(q31;q22) Mycosis fungoides/Sezary syndrome    
15q26 del(15)(q22q26) Mycosis fungoides/Sezary syndrome    
16p13 add(16)(p13) Mycosis fungoides/Sezary syndrome    
16q22 add(16)(q22) Mycosis fungoides/Sezary syndrome    
16q24 add(16)(q24) Mycosis fungoides/Sezary syndrome    
17p11 add(17)(p11) Mycosis fungoides/Sezary syndrome    
17p13 add(17)(p13) Mycosis fungoides/Sezary syndrome    
17q10 i(17)(q10) Mycosis fungoides/Sezary syndrome   15   
17q21 add(17)(q21) Mycosis fungoides/Sezary syndrome    
17q25 add(17)(q25) Mycosis fungoides/Sezary syndrome    
19p13 add(19)(p13) Mycosis fungoides/Sezary syndrome    
19q13 add(19)(q13) Mycosis fungoides/Sezary syndrome    
20q13 add(20)(q13) Mycosis fungoides/Sezary syndrome    
21q22 add(21)(q22) Mycosis fungoides/Sezary syndrome    
22q13 add(22)(q13) Mycosis fungoides/Sezary syndrome    
22q13 der(22)t(3;22)(p21;q13) Mycosis fungoides/Sezary syndrome    

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Mycosis fungoides/Sezary syndrome    
+3 Mycosis fungoides/Sezary syndrome    
+4 Mycosis fungoides/Sezary syndrome    
+5 Mycosis fungoides/Sezary syndrome    
+6 Mycosis fungoides/Sezary syndrome    
+7 Mycosis fungoides/Sezary syndrome   12   
+8 Mycosis fungoides/Sezary syndrome   14   
+9 Mycosis fungoides/Sezary syndrome    
+11 Mycosis fungoides/Sezary syndrome    
+14 Mycosis fungoides/Sezary syndrome    
+15 Mycosis fungoides/Sezary syndrome    
+16 Mycosis fungoides/Sezary syndrome    
+17 Mycosis fungoides/Sezary syndrome    
+18 Mycosis fungoides/Sezary syndrome   15   
+19 Mycosis fungoides/Sezary syndrome    
+20 Mycosis fungoides/Sezary syndrome    
+21 Mycosis fungoides/Sezary syndrome    
+22 Mycosis fungoides/Sezary syndrome    
+X Mycosis fungoides/Sezary syndrome    
+Y Mycosis fungoides/Sezary syndrome    

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Mycosis fungoides/Sezary syndrome    
-2 Mycosis fungoides/Sezary syndrome   10   
-3 Mycosis fungoides/Sezary syndrome    
-4 Mycosis fungoides/Sezary syndrome    
-5 Mycosis fungoides/Sezary syndrome    
-6 Mycosis fungoides/Sezary syndrome   18   
-7 Mycosis fungoides/Sezary syndrome    
-8 Mycosis fungoides/Sezary syndrome   18   
-9 Mycosis fungoides/Sezary syndrome   28   
-10 Mycosis fungoides/Sezary syndrome   56   
-11 Mycosis fungoides/Sezary syndrome   17   
-12 Mycosis fungoides/Sezary syndrome   17   
-13 Mycosis fungoides/Sezary syndrome   22   
-14 Mycosis fungoides/Sezary syndrome   15   
-15 Mycosis fungoides/Sezary syndrome   21   
-16 Mycosis fungoides/Sezary syndrome    
-17 Mycosis fungoides/Sezary syndrome   20   
-18 Mycosis fungoides/Sezary syndrome   10   
-19 Mycosis fungoides/Sezary syndrome   11   
-20 Mycosis fungoides/Sezary syndrome    
-21 Mycosis fungoides/Sezary syndrome    
-22 Mycosis fungoides/Sezary syndrome   15   
-X Mycosis fungoides/Sezary syndrome   22   
-Y Mycosis fungoides/Sezary syndrome   13