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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
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[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
2p23 t(2;5)(p23;q35) Mature T- and NK-cell neoplasm, NOS   NPM1/ALK
5q35 t(2;5)(p23;q35) Mature T- and NK-cell neoplasm, NOS   NPM1/ALK
11p13 t(11;14)(p13;q11) Mature T- and NK-cell neoplasm, NOS    
14q11 inv(14)(q11q32) Mature T- and NK-cell neoplasm, NOS   IGH/TRA
14q11 t(11;14)(p13;q11) Mature T- and NK-cell neoplasm, NOS    
14q11 t(14;14)(q11;q32) Mature T- and NK-cell neoplasm, NOS    
14q32 inv(14)(q11q32) Mature T- and NK-cell neoplasm, NOS   IGH/TRA
14q32 t(14;14)(q11;q32) Mature T- and NK-cell neoplasm, NOS    
14q32 t(14;18)(q32;q21) Mature T- and NK-cell neoplasm, NOS    
18q21 t(14;18)(q32;q21) Mature T- and NK-cell neoplasm, NOS    

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p13 del(1)(p13) Mature T- and NK-cell neoplasm, NOS    
1p36 add(1)(p36) Mature T- and NK-cell neoplasm, NOS    
1q10 i(1)(q10) Mature T- and NK-cell neoplasm, NOS    
1q21 add(1)(q21) Mature T- and NK-cell neoplasm, NOS    
1q32 del(1)(q32) Mature T- and NK-cell neoplasm, NOS    
1q42 add(1)(q42) Mature T- and NK-cell neoplasm, NOS    
1q42 del(1)(q42) Mature T- and NK-cell neoplasm, NOS    
2q33 del(2)(q33) Mature T- and NK-cell neoplasm, NOS    
3p25 add(3)(p25) Mature T- and NK-cell neoplasm, NOS    
3q12 add(3)(q12) Mature T- and NK-cell neoplasm, NOS    
3q21 del(3)(q21) Mature T- and NK-cell neoplasm, NOS    
3q27 add(3)(q27) Mature T- and NK-cell neoplasm, NOS    
3q29 add(3)(q29) Mature T- and NK-cell neoplasm, NOS    
4p15 del(4)(p15) Mature T- and NK-cell neoplasm, NOS    
4q25 add(4)(q25) Mature T- and NK-cell neoplasm, NOS    
4q31 del(4)(q31) Mature T- and NK-cell neoplasm, NOS    
5p13 del(5)(p13p15) Mature T- and NK-cell neoplasm, NOS    
5p15 del(5)(p13p15) Mature T- and NK-cell neoplasm, NOS    
5q22 del(5)(q22q31) Mature T- and NK-cell neoplasm, NOS    
5q31 del(5)(q22q31) Mature T- and NK-cell neoplasm, NOS    
6q13 del(6)(q13) Mature T- and NK-cell neoplasm, NOS    
6q15 del(6)(q15q21) Mature T- and NK-cell neoplasm, NOS    
6q21 del(6)(q15q21) Mature T- and NK-cell neoplasm, NOS    
6q21 del(6)(q21) Mature T- and NK-cell neoplasm, NOS    
6q23 del(6)(q23) Mature T- and NK-cell neoplasm, NOS    
6q25 add(6)(q25) Mature T- and NK-cell neoplasm, NOS    
7p22 add(7)(p22) Mature T- and NK-cell neoplasm, NOS    
7q10 i(7)(q10) Mature T- and NK-cell neoplasm, NOS    
7q22 add(7)(q22) Mature T- and NK-cell neoplasm, NOS    
7q32 del(7)(q32) Mature T- and NK-cell neoplasm, NOS    
8q10 i(8)(q10) Mature T- and NK-cell neoplasm, NOS    
10p11 del(10)(p11) Mature T- and NK-cell neoplasm, NOS    
10p13 del(10)(p13) Mature T- and NK-cell neoplasm, NOS    
12q13 add(12)(q13) Mature T- and NK-cell neoplasm, NOS    
12q22 del(12)(q22) Mature T- and NK-cell neoplasm, NOS    
12q24 add(12)(q24) Mature T- and NK-cell neoplasm, NOS    
13p11 add(13)(p11) Mature T- and NK-cell neoplasm, NOS    
14q32 add(14)(q32) Mature T- and NK-cell neoplasm, NOS    
15p11 add(15)(p11) Mature T- and NK-cell neoplasm, NOS    
16q22 del(16)(q22) Mature T- and NK-cell neoplasm, NOS    
16q24 add(16)(q24) Mature T- and NK-cell neoplasm, NOS    
17p11 add(17)(p11) Mature T- and NK-cell neoplasm, NOS    
17p13 add(17)(p13) Mature T- and NK-cell neoplasm, NOS    
17q10 i(17)(q10) Mature T- and NK-cell neoplasm, NOS    
18q10 i(18)(q10) Mature T- and NK-cell neoplasm, NOS    
18q21 del(18)(q21) Mature T- and NK-cell neoplasm, NOS    
18q23 add(18)(q23) Mature T- and NK-cell neoplasm, NOS    
19p13 add(19)(p13) Mature T- and NK-cell neoplasm, NOS    
19q13 add(19)(q13) Mature T- and NK-cell neoplasm, NOS    
22p13 add(22)(p13) Mature T- and NK-cell neoplasm, NOS    

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Mature T- and NK-cell neoplasm, NOS    
+2 Mature T- and NK-cell neoplasm, NOS    
+3 Mature T- and NK-cell neoplasm, NOS   21   
+4 Mature T- and NK-cell neoplasm, NOS    
+5 Mature T- and NK-cell neoplasm, NOS   15   
+6 Mature T- and NK-cell neoplasm, NOS    
+7 Mature T- and NK-cell neoplasm, NOS   16   
+8 Mature T- and NK-cell neoplasm, NOS    
+9 Mature T- and NK-cell neoplasm, NOS    
+10 Mature T- and NK-cell neoplasm, NOS    
+11 Mature T- and NK-cell neoplasm, NOS    
+12 Mature T- and NK-cell neoplasm, NOS    
+14 Mature T- and NK-cell neoplasm, NOS    
+15 Mature T- and NK-cell neoplasm, NOS    
+16 Mature T- and NK-cell neoplasm, NOS    
+17 Mature T- and NK-cell neoplasm, NOS    
+18 Mature T- and NK-cell neoplasm, NOS    
+19 Mature T- and NK-cell neoplasm, NOS   10   
+20 Mature T- and NK-cell neoplasm, NOS    
+21 Mature T- and NK-cell neoplasm, NOS    
+22 Mature T- and NK-cell neoplasm, NOS    
+X Mature T- and NK-cell neoplasm, NOS   13   

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Mature T- and NK-cell neoplasm, NOS    
-2 Mature T- and NK-cell neoplasm, NOS    
-3 Mature T- and NK-cell neoplasm, NOS    
-4 Mature T- and NK-cell neoplasm, NOS    
-5 Mature T- and NK-cell neoplasm, NOS    
-6 Mature T- and NK-cell neoplasm, NOS    
-7 Mature T- and NK-cell neoplasm, NOS    
-8 Mature T- and NK-cell neoplasm, NOS   11   
-9 Mature T- and NK-cell neoplasm, NOS   11   
-10 Mature T- and NK-cell neoplasm, NOS   13   
-11 Mature T- and NK-cell neoplasm, NOS    
-12 Mature T- and NK-cell neoplasm, NOS    
-13 Mature T- and NK-cell neoplasm, NOS   11   
-14 Mature T- and NK-cell neoplasm, NOS   14   
-15 Mature T- and NK-cell neoplasm, NOS    
-16 Mature T- and NK-cell neoplasm, NOS    
-17 Mature T- and NK-cell neoplasm, NOS    
-18 Mature T- and NK-cell neoplasm, NOS    
-19 Mature T- and NK-cell neoplasm, NOS    
-20 Mature T- and NK-cell neoplasm, NOS    
-21 Mature T- and NK-cell neoplasm, NOS   10   
-22 Mature T- and NK-cell neoplasm, NOS    
-X Mature T- and NK-cell neoplasm, NOS    
-Y Mature T- and NK-cell neoplasm, NOS