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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

Expand Gene List:




[Full Text]

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
3p23 der(19)t(3;19)(p23;q13) B-cell lymphoma associated with hemophagocytic syndrome    
8p21 del(8)(p21) B-cell lymphoma associated with hemophagocytic syndrome    
9p24 add(9)(p24) B-cell lymphoma associated with hemophagocytic syndrome    
12p11 add(12)(p11) B-cell lymphoma associated with hemophagocytic syndrome    
19q13 der(19)t(3;19)(p23;q13) B-cell lymphoma associated with hemophagocytic syndrome    
22q13 add(22)(q13) B-cell lymphoma associated with hemophagocytic syndrome    

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+2 B-cell lymphoma associated with hemophagocytic syndrome    
+5 B-cell lymphoma associated with hemophagocytic syndrome    
+18 B-cell lymphoma associated with hemophagocytic syndrome    
+20 B-cell lymphoma associated with hemophagocytic syndrome    

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-7 B-cell lymphoma associated with hemophagocytic syndrome    
-8 B-cell lymphoma associated with hemophagocytic syndrome    
-17 B-cell lymphoma associated with hemophagocytic syndrome    
-18 B-cell lymphoma associated with hemophagocytic syndrome    
-19 B-cell lymphoma associated with hemophagocytic syndrome