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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




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[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
2p12 t(2;8)(p12;q24) Mantle cell lymphoma    
3p14 t(3;10)(p14;q22) Mantle cell lymphoma    
3q29 t(3;17)(q29;q24) Mantle cell lymphoma    
6p23 inv(6)(p23q11) Mantle cell lymphoma    
6q11 inv(6)(p23q11) Mantle cell lymphoma    
8q24 t(2;8)(p12;q24) Mantle cell lymphoma    
8q24 t(8;11)(q24;q13) Mantle cell lymphoma    
8q24 t(8;14)(q24;q32) Mantle cell lymphoma   10  IGH/MYC
8q24 t(8;9)(q24;q13) Mantle cell lymphoma    
9q13 t(8;9)(q24;q13) Mantle cell lymphoma    
10q22 t(3;10)(p14;q22) Mantle cell lymphoma    
11q13 t(11;14)(q13;q24) Mantle cell lymphoma    
11q13 t(11;14)(q13;q32) Mantle cell lymphoma   466  IGH/CCND1
11q13 t(8;11)(q24;q13) Mantle cell lymphoma    
12p13 t(12;14)(p13;q32) Mantle cell lymphoma   IGH/CCND2
12q12 t(12;14)(q12;p12) Mantle cell lymphoma    
14p12 t(12;14)(q12;p12) Mantle cell lymphoma    
14q24 t(11;14)(q13;q24) Mantle cell lymphoma    
14q32 t(11;14)(q13;q32) Mantle cell lymphoma   466  IGH/CCND1
14q32 t(12;14)(p13;q32) Mantle cell lymphoma   IGH/CCND2
14q32 t(14;18)(q32;q21) Mantle cell lymphoma    
14q32 t(8;14)(q24;q32) Mantle cell lymphoma   10  IGH/MYC
17q24 t(3;17)(q29;q24) Mantle cell lymphoma    
18q21 t(14;18)(q32;q21) Mantle cell lymphoma    
Xp22 t(X;4)(p22;P12) Mantle cell lymphoma    
t(X;4)(p22;P12) Mantle cell lymphoma    

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p11 del(1)(p11p31) Mantle cell lymphoma    
1p12 del(1)(p12p22) Mantle cell lymphoma    
1p12 del(1)(p12p31) Mantle cell lymphoma    
1p13 add(1)(p13) Mantle cell lymphoma    
1p13 del(1)(p13p22) Mantle cell lymphoma    
1p13 del(1)(p13p31) Mantle cell lymphoma    
1p21 del(1)(p21) Mantle cell lymphoma    
1p21 del(1)(p21p31) Mantle cell lymphoma    
1p22 add(1)(p22) Mantle cell lymphoma    
1p22 del(1)(p12p22) Mantle cell lymphoma    
1p22 del(1)(p13p22) Mantle cell lymphoma    
1p22 del(1)(p22p31) Mantle cell lymphoma    
1p22 del(1)(p22p32) Mantle cell lymphoma    
1p31 del(1)(p11p31) Mantle cell lymphoma    
1p31 del(1)(p12p31) Mantle cell lymphoma    
1p31 del(1)(p13p31) Mantle cell lymphoma    
1p31 del(1)(p21p31) Mantle cell lymphoma    
1p31 del(1)(p22p31) Mantle cell lymphoma    
1p32 del(1)(p22p32) Mantle cell lymphoma    
1p34 del(1)(p34) Mantle cell lymphoma    
1p36 add(1)(p36) Mantle cell lymphoma   12   
1p36 der(1)t(1;2)(p36;p21) Mantle cell lymphoma    
1q21 add(1)(q21) Mantle cell lymphoma    
1q21 del(1)(q21) Mantle cell lymphoma    
1q24 del(1)(q24) Mantle cell lymphoma    
1q25 dup(1)(q25q44) Mantle cell lymphoma    
1q32 add(1)(q32) Mantle cell lymphoma    
1q32 del(1)(q32) Mantle cell lymphoma    
1q44 dup(1)(q25q44) Mantle cell lymphoma    
2p21 der(1)t(1;2)(p36;p21) Mantle cell lymphoma    
2p23 add(2)(p23) Mantle cell lymphoma    
2p23 del(2)(p23) Mantle cell lymphoma    
2p25 add(2)(p25) Mantle cell lymphoma    
2q31 del(2)(q31q33) Mantle cell lymphoma    
2q33 del(2)(q31q33) Mantle cell lymphoma    
2q33 del(2)(q33) Mantle cell lymphoma    
2q37 add(2)(q37) Mantle cell lymphoma    
3p11 add(3)(p11) Mantle cell lymphoma    
3p12 add(3)(p12) Mantle cell lymphoma    
3p21 del(3)(p21) Mantle cell lymphoma    
3p21 del(3)(p21p23) Mantle cell lymphoma    
3p23 del(3)(p21p23) Mantle cell lymphoma    
3p24 add(3)(p24) Mantle cell lymphoma    
3q10 i(3)(q10) Mantle cell lymphoma    
3q11 del(3)(q11) Mantle cell lymphoma    
3q11 dup(3)(q11q29) Mantle cell lymphoma    
3q13 der(17)t(3;17)(q13;p11) Mantle cell lymphoma    
3q27 add(3)(q27) Mantle cell lymphoma    
3q29 add(3)(q29) Mantle cell lymphoma    
3q29 der(3)t(3;13)(q29;q11) Mantle cell lymphoma    
3q29 dup(3)(q11q29) Mantle cell lymphoma    
4p16 add(4)(p16) Mantle cell lymphoma    
4q31 del(4)(q31) Mantle cell lymphoma    
4q35 add(4)(q35) Mantle cell lymphoma    
5p11 der(15)t(5;15)(p11;p11) Mantle cell lymphoma    
5p15 add(5)(p15) Mantle cell lymphoma    
5q35 add(5)(q35) Mantle cell lymphoma    
6p10 i(6)(p10) Mantle cell lymphoma    
6p12 del(6)(p12) Mantle cell lymphoma    
6p21 del(6)(p21) Mantle cell lymphoma    
6q12 add(6)(q12) Mantle cell lymphoma    
6q12 del(6)(q12) Mantle cell lymphoma    
6q13 del(6)(q13) Mantle cell lymphoma    
6q13 del(6)(q13q26) Mantle cell lymphoma    
6q14 del(6)(q14) Mantle cell lymphoma    
6q14 del(6)(q14q24) Mantle cell lymphoma    
6q14 del(6)(q14q25) Mantle cell lymphoma    
6q15 del(6)(q15) Mantle cell lymphoma    
6q16 del(6)(q16) Mantle cell lymphoma    
6q21 del(6)(q21) Mantle cell lymphoma   13   
6q21 del(6)(q21q25) Mantle cell lymphoma    
6q22 del(6)(q22) Mantle cell lymphoma    
6q23 del(6)(q23) Mantle cell lymphoma    
6q23 del(6)(q23q25) Mantle cell lymphoma    
6q24 del(6)(q14q24) Mantle cell lymphoma    
6q25 add(6)(q25) Mantle cell lymphoma    
6q25 del(6)(q14q25) Mantle cell lymphoma    
6q25 del(6)(q21q25) Mantle cell lymphoma    
6q25 del(6)(q23q25) Mantle cell lymphoma    
6q25 del(6)(q25) Mantle cell lymphoma    
6q26 del(6)(q13q26) Mantle cell lymphoma    
6q27 add(6)(q27) Mantle cell lymphoma    
7p22 add(7)(p22) Mantle cell lymphoma    
7q11 del(7)(q11) Mantle cell lymphoma    
7q22 del(7)(q22) Mantle cell lymphoma    
7q22 del(7)(q22q32) Mantle cell lymphoma    
7q32 del(7)(q22q32) Mantle cell lymphoma    
7q32 del(7)(q32) Mantle cell lymphoma    
7q36 add(7)(q36) Mantle cell lymphoma    
8p11 add(8)(p11) Mantle cell lymphoma    
8p11 del(8)(p11) Mantle cell lymphoma    
8p12 add(8)(p12) Mantle cell lymphoma    
8p12 del(8)(p12) Mantle cell lymphoma    
8p23 add(8)(p23) Mantle cell lymphoma    
8q10 der(8;9)(q10;q10) Mantle cell lymphoma    
8q10 i(8)(q10) Mantle cell lymphoma    
8q11 der(12)t(8;12)(q11;p13) Mantle cell lymphoma    
8q23 dup(8)(q23q24) Mantle cell lymphoma    
8q24 add(8)(q24) Mantle cell lymphoma   10  MYC+
8q24 dic(8;9)(q24;p24) Mantle cell lymphoma    

Band Abnormality Morphology Topography Cases Genes
8q24 dup(8)(q23q24) Mantle cell lymphoma    
9p12 del(9)(p12) Mantle cell lymphoma    
9p13 del(9)(p13) Mantle cell lymphoma    
9p21 add(9)(p21) Mantle cell lymphoma    
9p21 del(9)(p21) Mantle cell lymphoma    
9p22 del(9)(p22) Mantle cell lymphoma    
9p24 add(9)(p24) Mantle cell lymphoma    
9p24 dic(8;9)(q24;p24) Mantle cell lymphoma    
9q10 der(8;9)(q10;q10) Mantle cell lymphoma    
9q10 i(9)(q10) Mantle cell lymphoma    
9q11 der(9)t(9;11)(q11;p11) Mantle cell lymphoma    
9q13 del(9)(q13) Mantle cell lymphoma    
9q22 del(9)(q22) Mantle cell lymphoma    
9q31 del(9)(q31) Mantle cell lymphoma    
9q34 add(9)(q34) Mantle cell lymphoma    
9q34 der(9)t(9;11)(q34;q13) Mantle cell lymphoma    
10p11 add(10)(p11) Mantle cell lymphoma    
10p12 add(10)(p12) Mantle cell lymphoma    
10p13 add(10)(p13) Mantle cell lymphoma    
10p15 add(10)(p15) Mantle cell lymphoma    
10q24 add(10)(q24) Mantle cell lymphoma    
10q24 del(10)(q24) Mantle cell lymphoma    
10q25 add(10)(q25) Mantle cell lymphoma    
10q26 add(10)(q26) Mantle cell lymphoma    
11p11 del(11)(p11) Mantle cell lymphoma    
11p11 der(9)t(9;11)(q11;p11) Mantle cell lymphoma    
11p15 add(11)(p15) Mantle cell lymphoma    
11q13 add(11)(q13) Mantle cell lymphoma    
11q13 del(11)(q13) Mantle cell lymphoma   CCND1+
11q13 der(11)t(11;14)(q13;q32) Mantle cell lymphoma   28   
11q13 der(14)t(11;14)(q13;q32) Mantle cell lymphoma   25   
11q13 der(16)t(11;16)(q13;q24) Mantle cell lymphoma    
11q13 der(9)t(9;11)(q34;q13) Mantle cell lymphoma    
11q13 dup(11)(q13q23) Mantle cell lymphoma    
11q13 dup(11)(q13q25) Mantle cell lymphoma    
11q21 del(11)(q21q23) Mantle cell lymphoma    
11q21 der(14)t(11;14)del(11)(q21q23) Mantle cell lymphoma    
11q22 add(11)(q22) Mantle cell lymphoma    
11q23 del(11)(q21q23) Mantle cell lymphoma    
11q23 del(11)(q23) Mantle cell lymphoma    
11q23 der(14)t(11;14)del(11)(q21q23) Mantle cell lymphoma    
11q23 dup(11)(q13q23) Mantle cell lymphoma    
11q25 add(11)(q25) Mantle cell lymphoma    
11q25 dup(11)(q13q25) Mantle cell lymphoma    
12p11 add(12)(p11) Mantle cell lymphoma    
12p11 del(12)(p11) Mantle cell lymphoma    
12p13 add(12)(p13) Mantle cell lymphoma    
12p13 del(12)(p13) Mantle cell lymphoma    
12p13 der(12)t(8;12)(q11;p13) Mantle cell lymphoma    
12q15 del(12)(q15) Mantle cell lymphoma    
12q24 add(12)(q24) Mantle cell lymphoma    
13p11 add(13)(p11) Mantle cell lymphoma    
13p13 add(13)(p13) Mantle cell lymphoma    
13q11 der(3)t(3;13)(q29;q11) Mantle cell lymphoma    
13q12 del(13)(q12q14) Mantle cell lymphoma    
13q14 add(13)(q14) Mantle cell lymphoma    
13q14 del(13)(q12q14) Mantle cell lymphoma    
13q14 del(13)(q14q21) Mantle cell lymphoma    
13q14 del(13)(q14q22) Mantle cell lymphoma    
13q21 del(13)(q14q21) Mantle cell lymphoma    
13q22 add(13)(q22) Mantle cell lymphoma    
13q22 del(13)(q14q22) Mantle cell lymphoma    
13q32 add(13)(q32) Mantle cell lymphoma    
13q34 add(13)(q34) Mantle cell lymphoma    
14p11 add(14)(p11) Mantle cell lymphoma    
14p11 der(14)add(14)(p11)t(11;14) Mantle cell lymphoma    
14q22 del(14)(q22) Mantle cell lymphoma    
14q32 add(14)(q32) Mantle cell lymphoma   15   
14q32 der(11)t(11;14)(q13;q32) Mantle cell lymphoma   28   
14q32 der(14)t(11;14)(q13;q32) Mantle cell lymphoma   25   
15p11 add(15)(p11) Mantle cell lymphoma    
15p11 der(15)t(5;15)(p11;p11) Mantle cell lymphoma    
15q22 add(15)(q22) Mantle cell lymphoma    
15q22 der(19)t(15;19)(q22;q11) Mantle cell lymphoma    
15q25 add(15)(q25) Mantle cell lymphoma    
15q26 add(15)(q26) Mantle cell lymphoma    
16p13 add(16)(p13) Mantle cell lymphoma    
16q22 del(16)(q22) Mantle cell lymphoma    
16q24 add(16)(q24) Mantle cell lymphoma    
16q24 der(16)t(11;16)(q13;q24) Mantle cell lymphoma    
17p11 add(17)(p11) Mantle cell lymphoma    
17p11 del(17)(p11) Mantle cell lymphoma    
17p11 der(17)t(3;17)(q13;p11) Mantle cell lymphoma    
17p13 add(17)(p13) Mantle cell lymphoma    
17p13 del(17)(p13) Mantle cell lymphoma    
17q10 i(17)(q10) Mantle cell lymphoma   12   
17q21 add(17)(q21) Mantle cell lymphoma    
18p11 add(18)(p11) Mantle cell lymphoma    
18q10 i(18)(q10) Mantle cell lymphoma    
18q21 add(18)(q21) Mantle cell lymphoma    
18q21 del(18)(q21) Mantle cell lymphoma    
18q22 del(18)(q22q23) Mantle cell lymphoma    
18q23 add(18)(q23) Mantle cell lymphoma    
18q23 del(18)(q22q23) Mantle cell lymphoma    
19p13 add(19)(p13) Mantle cell lymphoma    
19q11 der(19)t(15;19)(q22;q11) Mantle cell lymphoma    
19q13 add(19)(q13) Mantle cell lymphoma    
20q11 del(20)(q11) Mantle cell lymphoma    
20q13 add(20)(q13) Mantle cell lymphoma    
21p11 add(21)(p11) Mantle cell lymphoma    

Band Abnormality Morphology Topography Cases Genes
21p13 add(21)(p13) Mantle cell lymphoma    
21q10 i(21)(q10) Mantle cell lymphoma    
22p13 add(22)(p13) Mantle cell lymphoma    
22q13 add(22)(q13) Mantle cell lymphoma    
Xp22 r(X)(p22q28) Mantle cell lymphoma    
Xq26 del(X)(q26) Mantle cell lymphoma    
Xq28 r(X)(p22q28) Mantle cell lymphoma    

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+2 Mantle cell lymphoma    
+3 Mantle cell lymphoma   40   
+4 Mantle cell lymphoma    
+5 Mantle cell lymphoma    
+6 Mantle cell lymphoma    
+7 Mantle cell lymphoma   15   
+8 Mantle cell lymphoma   10   
+9 Mantle cell lymphoma    
+10 Mantle cell lymphoma    
+11 Mantle cell lymphoma    
+12 Mantle cell lymphoma   20   
+13 Mantle cell lymphoma    
+14 Mantle cell lymphoma    
+15 Mantle cell lymphoma    
+16 Mantle cell lymphoma    
+17 Mantle cell lymphoma    
+18 Mantle cell lymphoma   16   
+19 Mantle cell lymphoma    
+20 Mantle cell lymphoma    
+21 Mantle cell lymphoma   11   
+22 Mantle cell lymphoma    
+X Mantle cell lymphoma    
+Y Mantle cell lymphoma    

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Mantle cell lymphoma   24   
-2 Mantle cell lymphoma   17   
-3 Mantle cell lymphoma    
-4 Mantle cell lymphoma   22   
-5 Mantle cell lymphoma   18   
-6 Mantle cell lymphoma   24   
-7 Mantle cell lymphoma   12   
-8 Mantle cell lymphoma   45   
-9 Mantle cell lymphoma   58   
-10 Mantle cell lymphoma   38   
-11 Mantle cell lymphoma   30   
-12 Mantle cell lymphoma   27   
-13 Mantle cell lymphoma   92   
-14 Mantle cell lymphoma   36   
-15 Mantle cell lymphoma   50   
-16 Mantle cell lymphoma   18   
-17 Mantle cell lymphoma   46   
-18 Mantle cell lymphoma   24   
-19 Mantle cell lymphoma   14   
-20 Mantle cell lymphoma   27   
-21 Mantle cell lymphoma   38   
-22 Mantle cell lymphoma   43   
-X Mantle cell lymphoma   38   
-Y Mantle cell lymphoma   59