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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

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[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p36 t(1;3)(p36;q21) Refractory cytopenia with multilineage dysplasia    
2p21 t(2;11)(p21;q23) Refractory cytopenia with multilineage dysplasia    
3q21 t(1;3)(p36;q21) Refractory cytopenia with multilineage dysplasia    
11q23 t(2;11)(p21;q23) Refractory cytopenia with multilineage dysplasia    

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1q10 der(1;7)(q10;p10) Refractory cytopenia with multilineage dysplasia    
1q10 i(1)(q10) Refractory cytopenia with multilineage dysplasia    
5p10 der(5;17)(p10;q10) Refractory cytopenia with multilineage dysplasia   12   
5p10 i(5)(p10) Refractory cytopenia with multilineage dysplasia    
5q13 del(5)(q13q33) Refractory cytopenia with multilineage dysplasia    
5q14 del(5)(q14q34) Refractory cytopenia with multilineage dysplasia    
5q31 del(5)(q31q34) Refractory cytopenia with multilineage dysplasia    
5q33 del(5)(q13q33) Refractory cytopenia with multilineage dysplasia    
5q34 del(5)(q14q34) Refractory cytopenia with multilineage dysplasia    
5q34 del(5)(q31q34) Refractory cytopenia with multilineage dysplasia    
6p12 add(6)(p12) Refractory cytopenia with multilineage dysplasia    
6p22 del(6)(p22) Refractory cytopenia with multilineage dysplasia    
7p10 der(1;7)(q10;p10) Refractory cytopenia with multilineage dysplasia    
7p11 der(7)del(7)(p11)del(7)(q11) Refractory cytopenia with multilineage dysplasia    
7q11 add(7)(q11) Refractory cytopenia with multilineage dysplasia    
7q11 del(7)(q11) Refractory cytopenia with multilineage dysplasia    
7q11 der(7)del(7)(p11)del(7)(q11) Refractory cytopenia with multilineage dysplasia    
7q22 del(7)(q22) Refractory cytopenia with multilineage dysplasia    
7q22 del(7)(q22q34) Refractory cytopenia with multilineage dysplasia    
7q34 del(7)(q22q34) Refractory cytopenia with multilineage dysplasia    
9q22 del(9)(q22) Refractory cytopenia with multilineage dysplasia    
11q23 del(11)(q23) Refractory cytopenia with multilineage dysplasia    
13q13 del(13)(q13q21) Refractory cytopenia with multilineage dysplasia    
13q21 del(13)(q13q21) Refractory cytopenia with multilineage dysplasia    
14p11 add(14)(p11) Refractory cytopenia with multilineage dysplasia    
17q10 der(5;17)(p10;q10) Refractory cytopenia with multilineage dysplasia   12   
20p11 der(20;20)dic(20;20)(p11;p11)del(20)(q11q13)del(20) Refractory cytopenia with multilineage dysplasia    
20p11 der(20;20)dic(20;20)(p11;p11)del(20)(q11q13)del(20) Refractory cytopenia with multilineage dysplasia    
20q11 del(20)(q11) Refractory cytopenia with multilineage dysplasia    
20q11 del(20)(q11q13) Refractory cytopenia with multilineage dysplasia    
20q11 der(20;20)dic(20;20)(p11;p11)del(20)(q11q13)del(20) Refractory cytopenia with multilineage dysplasia    
20q12 del(20)(q12) Refractory cytopenia with multilineage dysplasia    
20q13 del(20)(q11q13) Refractory cytopenia with multilineage dysplasia    
20q13 der(20;20)dic(20;20)(p11;p11)del(20)(q11q13)del(20) Refractory cytopenia with multilineage dysplasia    

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Refractory cytopenia with multilineage dysplasia    
+2 Refractory cytopenia with multilineage dysplasia    
+3 Refractory cytopenia with multilineage dysplasia    
+6 Refractory cytopenia with multilineage dysplasia    
+8 Refractory cytopenia with multilineage dysplasia   28   
+9 Refractory cytopenia with multilineage dysplasia    
+11 Refractory cytopenia with multilineage dysplasia    
+13 Refractory cytopenia with multilineage dysplasia    
+15 Refractory cytopenia with multilineage dysplasia    
+19 Refractory cytopenia with multilineage dysplasia    
+21 Refractory cytopenia with multilineage dysplasia    
+22 Refractory cytopenia with multilineage dysplasia    

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-3 Refractory cytopenia with multilineage dysplasia    
-5 Refractory cytopenia with multilineage dysplasia   12   
-6 Refractory cytopenia with multilineage dysplasia    
-7 Refractory cytopenia with multilineage dysplasia   30   
-12 Refractory cytopenia with multilineage dysplasia    
-13 Refractory cytopenia with multilineage dysplasia    
-14 Refractory cytopenia with multilineage dysplasia    
-15 Refractory cytopenia with multilineage dysplasia    
-16 Refractory cytopenia with multilineage dysplasia    
-17 Refractory cytopenia with multilineage dysplasia    
-18 Refractory cytopenia with multilineage dysplasia    
-20 Refractory cytopenia with multilineage dysplasia   12   
-21 Refractory cytopenia with multilineage dysplasia    
-22 Refractory cytopenia with multilineage dysplasia    
-X Refractory cytopenia with multilineage dysplasia    
-Y Refractory cytopenia with multilineage dysplasia