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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

Expand Gene List:




[Full Text]

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p11 add(1)(p11) Combined germ cell tumors Testis  
1p11 add(1)(p11) Seminoma/Dysgerminoma Testis  
1p11 add(1)(p11) Teratoma (mature and immature) Testis  
1p11 del(1)(p11) Seminoma/Dysgerminoma Testis  
1p11 del(1)(p11) Teratoma (mature and immature) Testis  
1p11 der(1)t(1;14)(p11;q11) Teratoma (mature and immature) Testis  
1p13 add(1)(p13) Combined germ cell tumors Testis  
1p13 add(1)(p13) Seminoma/Dysgerminoma Testis  
1p13 add(1)(p13) Teratoma (mature and immature) Testis  
1p13 del(1)(p13) Combined germ cell tumors Testis  
1p13 del(1)(p13) Seminoma/Dysgerminoma Testis  
1p13 del(1)(p13) Teratoma (mature and immature) Testis  
1p21 del(1)(p21) Combined germ cell tumors Testis  
1p21 del(1)(p21) Teratoma (mature and immature) Testis  
1p22 add(1)(p22) Seminoma/Dysgerminoma Testis  
1p22 add(1)(p22) Teratoma (mature and immature) Testis  
1p22 del(1)(p22) Teratoma (mature and immature) Testis  
1p31 add(1)(p31) Teratoma (mature and immature) Testis  
1p31 del(1)(p31) Teratoma (mature and immature) Testis  
1p32 add(1)(p32) Teratoma (mature and immature) Testis  
1p34 add(1)(p34) Teratoma (mature and immature) Testis  
1p34 del(1)(p34) Teratoma (mature and immature) Testis  
1p34 der(1)t(1;9)(p34;q11) Teratoma (mature and immature) Testis  
1p35 del(1)(p35) Teratoma (mature and immature) Testis  
1p36 add(1)(p36) Combined germ cell tumors Testis  
1p36 add(1)(p36) Seminoma/Dysgerminoma Testis  
1p36 add(1)(p36) Teratoma (mature and immature) Testis 18   
1p36 del(1)(p36) Seminoma/Dysgerminoma Testis  
1q10 i(1)(q10) Combined germ cell tumors Testis  
1q10 i(1)(q10) Seminoma/Dysgerminoma Testis  
1q10 i(1)(q10) Teratoma (mature and immature) Testis  
1q11 add(1)(q11) Combined germ cell tumors Testis  
1q11 add(1)(q11) Seminoma/Dysgerminoma Testis  
1q11 add(1)(q11) Teratoma (mature and immature) Testis  
1q11 del(1)(q11) Teratoma (mature and immature) Testis  
1q21 add(1)(q21) Combined germ cell tumors Testis  
1q21 add(1)(q21) Seminoma/Dysgerminoma Testis  
1q21 add(1)(q21) Teratoma (mature and immature) Testis  
1q32 add(1)(q32) Combined germ cell tumors Testis  
1q32 add(1)(q32) Seminoma/Dysgerminoma Testis  
1q41 del(1)(q41) Teratoma (mature and immature) Testis  
1q42 del(1)(q42) Teratoma (mature and immature) Testis  
2p11 add(2)(p11) Teratoma (mature and immature) Testis  
2p13 add(2)(p13) Teratoma (mature and immature) Testis  
2p23 add(2)(p23) Teratoma (mature and immature) Testis  
2p25 add(2)(p25) Teratoma (mature and immature) Testis  
2q10 i(2)(q10) Seminoma/Dysgerminoma Testis  
2q11 add(2)(q11) Teratoma (mature and immature) Testis  
2q33 del(2)(q33) Teratoma (mature and immature) Testis  
3p12 add(3)(p12) Teratoma (mature and immature) Testis  
3p13 add(3)(p13) Combined germ cell tumors Testis  
3p21 add(3)(p21) Teratoma (mature and immature) Testis  
3p21 del(3)(p21) Combined germ cell tumors Testis  
3p23 del(3)(p23) Teratoma (mature and immature) Testis  
3q24 add(3)(q24) Seminoma/Dysgerminoma Testis  
4p15 add(4)(p15) Combined germ cell tumors Testis  
4p16 add(4)(p16) Seminoma/Dysgerminoma Testis  
4q10 i(4)(q10) Seminoma/Dysgerminoma Testis  
4q34 add(4)(q34) Seminoma/Dysgerminoma Testis  
4q35 add(4)(q35) Seminoma/Dysgerminoma Testis  
4q35 add(4)(q35) Teratoma (mature and immature) Testis  
5p15 add(5)(p15) Combined germ cell tumors Testis  
5q13 del(5)(q13) Combined germ cell tumors Testis  
5q13 del(5)(q13) Teratoma (mature and immature) Testis  
5q14 del(5)(q14q23) Diffuse large B-cell lymphoma Testis  
5q23 del(5)(q14q23) Diffuse large B-cell lymphoma Testis  
5q35 add(5)(q35) Combined germ cell tumors Testis  
5q35 add(5)(q35) Teratoma (mature and immature) Testis  
6p10 i(6)(p10) Seminoma/Dysgerminoma Testis  
6p10 i(6)(p10) Teratoma (mature and immature) Testis  
6p23 add(6)(p23) Seminoma/Dysgerminoma Testis  
6q11 add(6)(q11) Teratoma (mature and immature) Testis  
6q12 del(6)(q12) Seminoma/Dysgerminoma Testis  
6q13 add(6)(q13) Combined germ cell tumors Testis  
6q13 add(6)(q13) Teratoma (mature and immature) Testis  
6q13 del(6)(q13) Combined germ cell tumors Testis  
6q13 del(6)(q13) Teratoma (mature and immature) Testis  
6q15 del(6)(q15) Teratoma (mature and immature) Testis  
6q16 add(6)(q16) Combined germ cell tumors Testis  
6q21 add(6)(q21) Teratoma (mature and immature) Testis  
6q21 del(6)(q21) Seminoma/Dysgerminoma Testis  
6q21 del(6)(q21) Teratoma (mature and immature) Testis  
6q21 del(6)(q21q23) Seminoma/Dysgerminoma Testis  
6q23 del(6)(q21q23) Seminoma/Dysgerminoma Testis  
6q25 del(6)(q25) Teratoma (mature and immature) Testis  
6q27 add(6)(q27) Seminoma/Dysgerminoma Testis  
7p10 i(7)(p10) Teratoma (mature and immature) Testis  
7p22 add(7)(p22) Teratoma (mature and immature) Testis  
7q11 add(7)(q11) Combined germ cell tumors Testis  
7q11 add(7)(q11) Teratoma (mature and immature) Testis  
7q11 del(7)(q11) Teratoma (mature and immature) Testis  
7q21 add(7)(q21) Combined germ cell tumors Testis  
7q21 add(7)(q21) Seminoma/Dysgerminoma Testis  
7q21 add(7)(q21) Teratoma (mature and immature) Testis  
7q22 add(7)(q22) Diffuse large B-cell lymphoma Testis  
7q22 add(7)(q22) Seminoma/Dysgerminoma Testis  
7q22 add(7)(q22) Teratoma (mature and immature) Testis  
7q22 del(7)(q22) Combined germ cell tumors Testis  
7q22 del(7)(q22) Teratoma (mature and immature) Testis  
7q31 add(7)(q31) Seminoma/Dysgerminoma Testis  

Band Abnormality Morphology Topography Cases Genes
7q31 add(7)(q31) Teratoma (mature and immature) Testis  
7q31 del(7)(q31) Combined germ cell tumors Testis  
7q32 add(7)(q32) Seminoma/Dysgerminoma Testis  
7q32 del(7)(q32) Teratoma (mature and immature) Testis  
7q36 add(7)(q36) Teratoma (mature and immature) Testis  
8p11 add(8)(p11) Seminoma/Dysgerminoma Testis  
8p21 del(8)(p21) Teratoma (mature and immature) Testis  
8p23 add(8)(p23) Teratoma (mature and immature) Testis  
8p23 der(8)t(8;9)(p23;q12) Combined germ cell tumors Testis  
8q10 i(8)(q10) Combined germ cell tumors Testis  
8q10 i(8)(q10) Seminoma/Dysgerminoma Testis  
8q24 add(8)(q24) Combined germ cell tumors Testis  
8q24 add(8)(q24) Teratoma (mature and immature) Testis  
9p22 add(9)(p22) Seminoma/Dysgerminoma Testis  
9p24 add(9)(p24) Seminoma/Dysgerminoma Testis  
9q10 i(9)(q10) Teratoma (mature and immature) Testis  
9q11 der(1)t(1;9)(p34;q11) Teratoma (mature and immature) Testis  
9q12 der(8)t(8;9)(p23;q12) Combined germ cell tumors Testis  
9q34 add(9)(q34) Seminoma/Dysgerminoma Testis  
10p13 add(10)(p13) Teratoma (mature and immature) Testis  
10p13 del(10)(p13) Combined germ cell tumors Testis  
10q26 add(10)(q26) Teratoma (mature and immature) Testis  
11p11 add(11)(p11) Seminoma/Dysgerminoma Testis  
11p12 del(11)(p12) Teratoma (mature and immature) Testis  
11p15 add(11)(p15) Seminoma/Dysgerminoma Testis  
11q13 add(11)(q13) Teratoma (mature and immature) Testis  
11q23 add(11)(q23) Seminoma/Dysgerminoma Testis  
11q23 add(11)(q23) Teratoma (mature and immature) Testis  
11q23 del(11)(q23) Combined germ cell tumors Testis  
11q23 del(11)(q23) Seminoma/Dysgerminoma Testis  
11q25 add(11)(q25) Combined germ cell tumors Testis  
11q25 add(11)(q25) Teratoma (mature and immature) Testis  
12p10 i(12)(p10) Combined germ cell tumors Testis 43   
12p10 i(12)(p10) Seminoma/Dysgerminoma Testis 48   
12p10 i(12)(p10) Teratoma (mature and immature) Testis 116   
12p11 add(12)(p11) Combined germ cell tumors Testis  
12p11 add(12)(p11) Seminoma/Dysgerminoma Testis  
12p12 add(12)(p12) Combined germ cell tumors Testis  
12p12 add(12)(p12) Seminoma/Dysgerminoma Testis  
12p13 add(12)(p13) Combined germ cell tumors Testis  
12p13 add(12)(p13) Seminoma/Dysgerminoma Testis  
12p13 add(12)(p13) Teratoma (mature and immature) Testis 13   
12q11 add(12)(q11) Combined germ cell tumors Testis  
12q11 add(12)(q11) Teratoma (mature and immature) Testis  
12q13 del(12)(q13) Teratoma (mature and immature) Testis  
12q15 del(12)(q15) Combined germ cell tumors Testis  
12q15 del(12)(q15) Teratoma (mature and immature) Testis  
12q24 add(12)(q24) Combined germ cell tumors Testis  
12q24 add(12)(q24) Seminoma/Dysgerminoma Testis  
12q24 add(12)(q24) Teratoma (mature and immature) Testis  
13p10 add(13)(p10) Teratoma (mature and immature) Testis  
13p11 add(13)(p11) Combined germ cell tumors Testis  
13q10 der(13;14)(q10;q10) Teratoma (mature and immature) Testis  
14p11 add(14)(p11) Teratoma (mature and immature) Testis  
14p12 add(14)(p12) Teratoma (mature and immature) Testis  
14q10 der(13;14)(q10;q10) Teratoma (mature and immature) Testis  
14q11 der(1)t(1;14)(p11;q11) Teratoma (mature and immature) Testis  
14q32 add(14)(q32) Diffuse large B-cell lymphoma Testis  
14q32 add(14)(q32) Seminoma/Dysgerminoma Testis  
14q32 add(14)(q32) Teratoma (mature and immature) Testis  
15p11 add(15)(p11) Combined germ cell tumors Testis  
15p11 add(15)(p11) Seminoma/Dysgerminoma Testis  
15p11 add(15)(p11) Teratoma (mature and immature) Testis  
15q22 add(15)(q22) Seminoma/Dysgerminoma Testis  
16q13 add(16)(q13) Seminoma/Dysgerminoma Testis  
16q21 add(16)(q21) Seminoma/Dysgerminoma Testis  
16q22 add(16)(q22) Combined germ cell tumors Testis  
16q22 add(16)(q22) Teratoma (mature and immature) Testis  
16q24 add(16)(q24) Seminoma/Dysgerminoma Testis  
16q24 add(16)(q24) Teratoma (mature and immature) Testis  
17p11 add(17)(p11) Seminoma/Dysgerminoma Testis  
17p11 del(17)(p11) Teratoma (mature and immature) Testis  
17p12 del(17)(p12) Teratoma (mature and immature) Testis  
17p13 add(17)(p13) Teratoma (mature and immature) Testis  
17q10 i(17)(q10) Combined germ cell tumors Testis  
17q10 i(17)(q10) Seminoma/Dysgerminoma Testis  
17q10 i(17)(q10) Teratoma (mature and immature) Testis  
17q25 add(17)(q25) Seminoma/Dysgerminoma Testis  
17q25 add(17)(q25) Teratoma (mature and immature) Testis  
18p11 add(18)(p11) Combined germ cell tumors Testis  
18p11 add(18)(p11) Teratoma (mature and immature) Testis  
18q23 add(18)(q23) Seminoma/Dysgerminoma Testis  
19p13 add(19)(p13) Combined germ cell tumors Testis  
19p13 add(19)(p13) Diffuse large B-cell lymphoma Testis  
19q12 add(19)(q12) Teratoma (mature and immature) Testis  
19q13 add(19)(q13) Combined germ cell tumors Testis  
19q13 add(19)(q13) Seminoma/Dysgerminoma Testis  
19q13 add(19)(q13) Teratoma (mature and immature) Testis  
20p13 add(20)(p13) Combined germ cell tumors Testis  
20p13 add(20)(p13) Teratoma (mature and immature) Testis  
20q13 add(20)(q13) Combined germ cell tumors Testis  
20q13 del(20)(q13) Teratoma (mature and immature) Testis  
21p12 add(21)(p12) Seminoma/Dysgerminoma Testis  
21q22 add(21)(q22) Teratoma (mature and immature) Testis  
22q10 i(22)(q10) Combined germ cell tumors Testis  
22q11 add(22)(q11) Teratoma (mature and immature) Testis  
22q11 del(22)(q11) Teratoma (mature and immature) Testis  
22q12 del(22)(q12) Teratoma (mature and immature) Testis  
22q13 add(22)(q13) Seminoma/Dysgerminoma Testis  
Xp11 add(X)(p11) Combined germ cell tumors Testis  
Xp22 add(X)(p22) Teratoma (mature and immature) Testis  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+1 Combined germ cell tumors Testis  
+1 Seminoma/Dysgerminoma Testis  
+1 Teratoma (mature and immature) Testis 10   
+2 Combined germ cell tumors Testis  
+2 Seminoma/Dysgerminoma Testis 11   
+2 Teratoma (mature and immature) Testis 18   
+3 Combined germ cell tumors Testis 13   
+3 Seminoma/Dysgerminoma Testis 12   
+3 Teratoma (mature and immature) Testis 18   
+4 Combined germ cell tumors Testis  
+4 Seminoma/Dysgerminoma Testis  
+4 Teratoma (mature and immature) Testis  
+5 Combined germ cell tumors Testis  
+5 Teratoma (mature and immature) Testis 12   
+6 Combined germ cell tumors Testis  
+6 Seminoma/Dysgerminoma Testis  
+6 Teratoma (mature and immature) Testis 14   
+7 Combined germ cell tumors Testis 20   
+7 Diffuse large B-cell lymphoma Testis  
+7 Seminoma/Dysgerminoma Testis 33   
+7 Teratoma (mature and immature) Testis 43   
+8 Combined germ cell tumors Testis 26   
+8 Diffuse large B-cell lymphoma Testis  
+8 Seminoma/Dysgerminoma Testis 35   
+8 Teratoma (mature and immature) Testis 49   
+9 Combined germ cell tumors Testis  
+9 Teratoma (mature and immature) Testis 11   
+10 Combined germ cell tumors Testis  
+10 Diffuse large B-cell lymphoma Testis  
+10 Seminoma/Dysgerminoma Testis  
+10 Teratoma (mature and immature) Testis  
+11 Seminoma/Dysgerminoma Testis  
+11 Teratoma (mature and immature) Testis  
+12 Combined germ cell tumors Testis 20   
+12 Diffuse large B-cell lymphoma Testis  
+12 Seminoma/Dysgerminoma Testis 21   
+12 Teratoma (mature and immature) Testis 36   
+13 Combined germ cell tumors Testis  
+13 Seminoma/Dysgerminoma Testis  
+13 Teratoma (mature and immature) Testis 13   
+14 Combined germ cell tumors Testis  
+14 Seminoma/Dysgerminoma Testis 15   
+14 Teratoma (mature and immature) Testis 10   
+15 Combined germ cell tumors Testis  
+15 Seminoma/Dysgerminoma Testis 26   
+15 Teratoma (mature and immature) Testis 13   
+16 Combined germ cell tumors Testis 11   
+16 Seminoma/Dysgerminoma Testis  
+16 Teratoma (mature and immature) Testis 13   
+17 Combined germ cell tumors Testis 14   
+17 Seminoma/Dysgerminoma Testis  
+17 Teratoma (mature and immature) Testis 31   
+18 Combined germ cell tumors Testis  
+18 Seminoma/Dysgerminoma Testis  
+18 Teratoma (mature and immature) Testis  
+19 Gonadal stromal cell tumors Testis  
+19 Seminoma/Dysgerminoma Testis 15   
+19 Teratoma (mature and immature) Testis 10   
+20 Combined germ cell tumors Testis 12   
+20 Diffuse large B-cell lymphoma Testis  
+20 Gonadal stromal cell tumors Testis  
+20 Seminoma/Dysgerminoma Testis 10   
+20 Teratoma (mature and immature) Testis 11   
+21 Combined germ cell tumors Testis 20   
+21 Diffuse large B-cell lymphoma Testis  
+21 Seminoma/Dysgerminoma Testis 38   
+21 Teratoma (mature and immature) Testis 49   
+22 Combined germ cell tumors Testis  
+22 Seminoma/Dysgerminoma Testis 17   
+22 Teratoma (mature and immature) Testis 15   
+X Combined germ cell tumors Testis 15   
+X Diffuse large B-cell lymphoma Testis  
+X Seminoma/Dysgerminoma Testis 12   
+X Teratoma (mature and immature) Testis 40   
+Y Combined germ cell tumors Testis 18   
+Y Diffuse large B-cell lymphoma Testis  
+Y Seminoma/Dysgerminoma Testis 18   
+Y Teratoma (mature and immature) Testis 22   

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Combined germ cell tumors Testis  
-1 Seminoma/Dysgerminoma Testis  
-1 Teratoma (mature and immature) Testis  
-2 Combined germ cell tumors Testis 10   
-2 Seminoma/Dysgerminoma Testis 12   
-2 Teratoma (mature and immature) Testis 31   
-3 Combined germ cell tumors Testis  
-3 Seminoma/Dysgerminoma Testis 14   
-3 Teratoma (mature and immature) Testis 11   
-4 Combined germ cell tumors Testis 37   
-4 Seminoma/Dysgerminoma Testis 43   
-4 Teratoma (mature and immature) Testis 74   
-5 Combined germ cell tumors Testis 30   
-5 Seminoma/Dysgerminoma Testis 54   
-5 Teratoma (mature and immature) Testis 70   
-6 Carcinoma in situ Testis  
-6 Combined germ cell tumors Testis 22   
-6 Seminoma/Dysgerminoma Testis 11   
-6 Teratoma (mature and immature) Testis 27   
-7 Combined germ cell tumors Testis  
-7 Seminoma/Dysgerminoma Testis  
-7 Teratoma (mature and immature) Testis 15   
-8 Combined germ cell tumors Testis 12   
-8 Diffuse large B-cell lymphoma Testis  
-8 Seminoma/Dysgerminoma Testis  
-8 Teratoma (mature and immature) Testis 15   
-9 Combined germ cell tumors Testis 33   
-9 Diffuse large B-cell lymphoma Testis  
-9 Seminoma/Dysgerminoma Testis 38   
-9 Teratoma (mature and immature) Testis 62   
-10 Combined germ cell tumors Testis 35   
-10 Diffuse large B-cell lymphoma Testis  
-10 Seminoma/Dysgerminoma Testis 38   
-10 Teratoma (mature and immature) Testis 74   
-11 Carcinoma in situ Testis  
-11 Combined germ cell tumors Testis 38   
-11 Diffuse large B-cell lymphoma Testis  
-11 Seminoma/Dysgerminoma Testis 48   
-11 Teratoma (mature and immature) Testis 73   
-12 Combined germ cell tumors Testis  
-12 Diffuse large B-cell lymphoma Testis  
-12 Seminoma/Dysgerminoma Testis  
-12 Teratoma (mature and immature) Testis  
-13 Combined germ cell tumors Testis 42   
-13 Diffuse large B-cell lymphoma Testis  
-13 Seminoma/Dysgerminoma Testis 59   
-13 Teratoma (mature and immature) Testis 75   
-14 Combined germ cell tumors Testis 23   
-14 Diffuse large B-cell lymphoma Testis  
-14 Seminoma/Dysgerminoma Testis 20   
-14 Teratoma (mature and immature) Testis 55   
-15 Combined germ cell tumors Testis 28   
-15 Diffuse large B-cell lymphoma Testis  
-15 Seminoma/Dysgerminoma Testis 16   
-15 Teratoma (mature and immature) Testis 66   
-16 Combined germ cell tumors Testis 24   
-16 Diffuse large B-cell lymphoma Testis  
-16 Seminoma/Dysgerminoma Testis 26   
-16 Teratoma (mature and immature) Testis 44   
-17 Combined germ cell tumors Testis 11   
-17 Diffuse large B-cell lymphoma Testis  
-17 Seminoma/Dysgerminoma Testis 37   
-17 Teratoma (mature and immature) Testis 16   
-18 Carcinoma in situ Testis  
-18 Combined germ cell tumors Testis 40   
-18 Seminoma/Dysgerminoma Testis 52   
-18 Teratoma (mature and immature) Testis 85   
-19 Combined germ cell tumors Testis 23   
-19 Diffuse large B-cell lymphoma Testis  
-19 Seminoma/Dysgerminoma Testis 16   
-19 Teratoma (mature and immature) Testis 65   
-20 Carcinoma in situ Testis  
-20 Combined germ cell tumors Testis 22   
-20 Diffuse large B-cell lymphoma Testis  
-20 Seminoma/Dysgerminoma Testis 15   
-20 Teratoma (mature and immature) Testis 40   
-21 Combined germ cell tumors Testis 15   
-21 Seminoma/Dysgerminoma Testis 13   
-21 Teratoma (mature and immature) Testis 25   
-22 Combined germ cell tumors Testis 31   
-22 Diffuse large B-cell lymphoma Testis  
-22 Germ cell tumor, special type Testis  
-22 Seminoma/Dysgerminoma Testis 16   
-22 Teratoma (mature and immature) Testis 60   
-X Combined germ cell tumors Testis  
-X Seminoma/Dysgerminoma Testis  
-X Teratoma (mature and immature) Testis 10   
-Y Combined germ cell tumors Testis 10   
-Y Diffuse large B-cell lymphoma Testis  
-Y Gonadal stromal cell tumors Testis  
-Y Seminoma/Dysgerminoma Testis 20   
-Y Teratoma (mature and immature) Testis 24