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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




Expand Topography List:

Expand Morphology List:

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[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
11q13 t(11;19)(q13;q13) Mesenchymal tumor, special type Liver  
19q13 t(11;19)(q13;q13) Mesenchymal tumor, special type Liver  

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p11 del(1)(p11) Adenocarcinoma Liver  
1p22 del(1)(p22) Adenocarcinoma Liver  
1p22 del(1)(p22) Hepatoblastoma Liver  
1p32 del(1)(p32) Adenocarcinoma Liver  
1p34 del(1)(p34) Adenocarcinoma Liver  
1p36 add(1)(p36) Hepatoblastoma Liver  
1q10 add(1)(q10) Adenocarcinoma Liver  
1q10 i(1)(q10) Hepatoblastoma Liver  
1q12 del(1)(q12) Adenocarcinoma Liver  
1q12 del(1)(q12) Hepatoblastoma Liver  
1q12 der(12)t(1;12)(q12;q24) Hepatoblastoma Liver  
1q12 der(2)t(1;2)(q12;q37) Hepatoblastoma Liver  
1q12 der(4)t(1;4)(q12;q33) Hepatoblastoma Liver  
1q12 der(4)t(1;4)(q12;q34) Hepatoblastoma Liver  
1q21 add(1)(q21) Adenocarcinoma Liver  
1q25 der(4)t(1;4)(q25;q32) Hepatoblastoma Liver  
2q37 der(2)t(1;2)(q12;q37) Hepatoblastoma Liver  
4q32 der(4)t(1;4)(q25;q32) Hepatoblastoma Liver  
4q33 der(4)t(1;4)(q12;q33) Hepatoblastoma Liver  
4q34 der(4)t(1;4)(q12;q34) Hepatoblastoma Liver  
4q35 add(4)(q35) Hepatoblastoma Liver  
6p10 i(6)(p10) Adenocarcinoma Liver  
6p10 i(6)(p10) Hepatoblastoma Liver  
7p15 der(7)del(7)(p15)del(7)(q32) Adenocarcinoma Liver  
7q32 der(7)del(7)(p15)del(7)(q32) Adenocarcinoma Liver  
8p23 add(8)(p23) Mesenchymal tumor, special type Liver  
8q10 i(8)(q10) Adenocarcinoma Liver  
8q10 i(8)(q10) Hepatoblastoma Liver  
12q24 der(12)t(1;12)(q12;q24) Hepatoblastoma Liver  
13p11 add(13)(p11) Adenocarcinoma Liver  
14q10 i(14)(q10) Adenocarcinoma Liver  
16q24 add(16)(q24) Adenocarcinoma Liver  
17p13 add(17)(p13) Mesenchymal tumor, special type Liver  

Numerical Chromosomal Trisomy Abnormalities

Abnormality Morphology Topography Cases Genes
+2 Adenocarcinoma Liver  
+2 Hepatoblastoma Liver 43   
+3 Adenocarcinoma Liver  
+4 Adenocarcinoma Liver  
+5 Hepatoblastoma Liver 15   
+6 Adenocarcinoma Liver  
+6 Hepatoblastoma Liver 11   
+7 Adenocarcinoma Liver  
+7 Hepatoblastoma Liver 17   
+7 Nonneoplastic disorder/lesion, special type Liver  
+8 Adenocarcinoma Liver  
+8 Hepatoblastoma Liver 37   
+10 Hepatoblastoma Liver  
+11 Adenocarcinoma Liver  
+12 Adenocarcinoma Liver  
+12 Hepatoblastoma Liver 10   
+12 Mesenchymal tumor, special type Liver  
+13 Adenocarcinoma Liver  
+13 Hepatoblastoma Liver  
+14 Hepatoblastoma Liver  
+15 Adenocarcinoma Liver  
+15 Hepatoblastoma Liver  
+16 Hepatoblastoma Liver  
+17 Adenocarcinoma Liver  
+17 Hepatoblastoma Liver  
+18 Adenocarcinoma Liver  
+18 Hepatoblastoma Liver  
+19 Hepatoblastoma Liver 14   
+20 Adenocarcinoma Liver  
+20 Hepatoblastoma Liver 58   
+21 Hepatoblastoma Liver  
+22 Hepatoblastoma Liver 12   
+X Hepatoblastoma Liver  
+X Soft tissue tumor, special type Liver  
+Y Hepatoblastoma Liver  

Numerical Chromosomal Monosomy Abnormalities

Abnormality Morphology Topography Cases Genes
-1 Hepatoblastoma Liver  
-3 Hepatoblastoma Liver  
-3 Mesenchymal tumor, special type Liver  
-4 Adenocarcinoma Liver  
-4 Hepatoblastoma Liver  
-4 Mesenchymal tumor, special type Liver  
-5 Adenocarcinoma Liver  
-5 Hepatoblastoma Liver  
-6 Adenocarcinoma Liver  
-7 Hepatoblastoma Liver  
-8 Adenocarcinoma Liver  
-8 Hepatoblastoma Liver  
-9 Adenocarcinoma Liver  
-9 Hepatoblastoma Liver  
-9 Mesenchymal tumor, special type Liver  
-10 Adenocarcinoma Liver  
-10 Hepatoblastoma Liver  
-10 Mesenchymal tumor, special type Liver  
-10 Soft tissue tumor, special type Liver  
-11 Adenocarcinoma Liver  
-11 Hepatoblastoma Liver  
-12 Adenocarcinoma Liver  
-12 Hepatoblastoma Liver  
-13 Adenocarcinoma Liver  
-13 Hepatoblastoma Liver  
-14 Adenocarcinoma Liver  
-14 Hepatoblastoma Liver  
-14 Mesenchymal tumor, special type Liver  
-15 Adenocarcinoma Liver  
-15 Hepatoblastoma Liver  
-15 Mesenchymal tumor, special type Liver  
-16 Adenocarcinoma Liver  
-16 Hepatoblastoma Liver  
-16 Mesenchymal tumor, special type Liver  
-17 Adenocarcinoma Liver  
-17 Hepatoblastoma Liver  
-18 Adenocarcinoma Liver  
-18 Hepatoblastoma Liver  
-18 Mesenchymal tumor, special type Liver  
-19 Hepatoblastoma Liver  
-19 Soft tissue tumor, special type Liver  
-20 Mesenchymal tumor, special type Liver  
-21 Adenocarcinoma Liver  
-21 Hepatoblastoma Liver  
-21 Mesenchymal tumor, special type Liver  
-22 Adenocarcinoma Liver  
-22 Mesenchymal tumor, special type Liver  
-X Adenocarcinoma Liver  
-X Hepatoblastoma Liver  
-X Mesenchymal tumor, special type Liver  
-X Soft tissue tumor, special type Liver  
-Y Adenocarcinoma Liver 12