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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

The Recurrent Chromosome Aberrations in Cancer Database Searcher
  • Brief instructions for searching the database:
    • You must choose one or both of the following two fields: Structural Aberrations and Numerical Aberrations.
    • If you choose Structural Aberrations, you must select at least one of the following fields: Breakpoint, Topography, Morphology, or Gene.
    • If you choose Numerical Aberrations, you must select at least one of the following fields: Chromosome, Topography, Morphology.
    • You may select only one item in each pulldown menu
    • Press Retrieve.
  • A successful search returns a table, with the following headings and entries:
    • Breakpoint, with each entry linked to the OMIM Gene Map (this column is returned only for structural aberrations)
    • Abnormality
    • Morphology, with each entry linked to a similar table that describes all abnormalities with this morphology.
    • Topography, with each entry linked to a similar table that describes all abnormalities at this topography
    • Number of cases, hyperlinked to the list of applicable cases
    • Genes

Aberration type:
Aberration type:




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[Full Text]

Balanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p13 inv(1)(p13q42) Acute lymphoblastic leukemia/lymphoblastic lymphoma    
1p13 t(1;2)(p13;q37) Localized giant cell tumor of tendon sheath Soft tissue COL6A3/CSF1
1p13 t(1;22)(p13;q13) Acute megakaryoblastic leukemia (FAB type M7)   47  RBM15/MKL1
1p13 t(1;3)(p13;p21) Juvenile myelomonocytic leukemia    
1p13 t(1;7)(p13;q33) Acute lymphoblastic leukemia/lymphoblastic lymphoma    
1p13 t(1;8)(p13;q24) Multiple myeloma    
1p13 t(1;8;21)(p13;q22;q22) Acute myeloblastic leukemia with maturation (FAB type M2)    
1p13 t(1;9)(p13;p13) Acute lymphoblastic leukemia/lymphoblastic lymphoma    

Unbalanced Chromosomal Abnormalities

Band Abnormality Morphology Topography Cases Genes
1p13 add(1)(p13) Acute lymphoblastic leukemia/lymphoblastic lymphoma    
1p13 add(1)(p13) Acute megakaryoblastic leukemia (FAB type M7)    
1p13 add(1)(p13) Acute myeloid leukemia, NOS    
1p13 add(1)(p13) Adenocarcinoma Kidney  
1p13 add(1)(p13) Adenocarcinoma Pancreas  
1p13 add(1)(p13) Adenocarcinoma Breast  
1p13 add(1)(p13) Adenocarcinoma Ovary  
1p13 add(1)(p13) Adenocarcinoma Stomach  
1p13 add(1)(p13) Adenocarcinoma Lung  
1p13 add(1)(p13) Adult T-cell lymphoma/leukemia (HTLV-1+)    
1p13 add(1)(p13) Alveolar rhabdomyosarcoma Soft tissue  
1p13 add(1)(p13) Astrocytoma, grade III-IV/Glioblastoma Brain  
1p13 add(1)(p13) Chronic myeloid leukemia, t(9;22)    
1p13 add(1)(p13) Combined germ cell tumors Testis  
1p13 add(1)(p13) Diffuse large B-cell lymphoma    
1p13 add(1)(p13) Follicular lymphoma    
1p13 add(1)(p13) Leiomyoma Uterus, corpus  
1p13 add(1)(p13) Leiomyosarcoma Soft tissue  
1p13 add(1)(p13) Malignant peripheral nerve sheath tumor/Triton Soft tissue  
1p13 add(1)(p13) Mantle cell lymphoma    
1p13 add(1)(p13) Mature B-cell neoplasm, NOS    
1p13 add(1)(p13) Meningioma Brain  
1p13 add(1)(p13) Mesothelioma Pleura  
1p13 add(1)(p13) Multiple myeloma   31   
1p13 add(1)(p13) Neuroblastoma Adrenal  
1p13 add(1)(p13) Seminoma/Dysgerminoma Testis  
1p13 add(1)(p13) Squamous cell carcinoma Lung  
1p13 add(1)(p13) Squamous cell carcinoma Tongue  
1p13 add(1)(p13) Teratoma (mature and immature) Testis  
1p13 add(1)(p13) Wilms tumor Kidney  
1p13 del(1)(p13) Acute erythroleukemia (FAB type M6)    
1p13 del(1)(p13) Acute lymphoblastic leukemia/lymphoblastic lymphoma    
1p13 del(1)(p13) Acute monoblastic leukemia (FAB type M5)    
1p13 del(1)(p13) Acute monoblastic leukemia without differentiation (FAB type M5a)    
1p13 del(1)(p13) Acute myeloblastic leukemia with maturation (FAB type M2)    
1p13 del(1)(p13) Acute myeloblastic leukemia with minimal differentiation (FAB type M0)    
1p13 del(1)(p13) Acute myeloblastic leukemia without maturation (FAB type M1)    
1p13 del(1)(p13) Acute myeloid leukemia, NOS    
1p13 del(1)(p13) Acute myelomonocytic leukemia (FAB type M4)    
1p13 del(1)(p13) Adenocarcinoma Large intestine  
1p13 del(1)(p13) Adenocarcinoma Uterus, corpus  
1p13 del(1)(p13) Adenocarcinoma Ovary  
1p13 del(1)(p13) Adenocarcinoma Breast 23   
1p13 del(1)(p13) Adenocarcinoma Kidney  
1p13 del(1)(p13) Adenocarcinoma Pancreas  
1p13 del(1)(p13) Adenocarcinoma Lung  
1p13 del(1)(p13) Astrocytoma, grade III-IV/Glioblastoma Brain  
1p13 del(1)(p13) Burkitt lymphoma/leukemia    
1p13 del(1)(p13) Carcinoma, NOS Breast  
1p13 del(1)(p13) Chronic lymphocytic leukemia    
1p13 del(1)(p13) Chronic myeloid leukemia, t(9;22)    
1p13 del(1)(p13) Combined germ cell tumors Testis  
1p13 del(1)(p13) Diffuse large B-cell lymphoma   12   
1p13 del(1)(p13) Follicular lymphoma    
1p13 del(1)(p13) Germ cell tumor, NOS Intrathoracal  
1p13 del(1)(p13) Malignant melanoma Skin  
1p13 del(1)(p13) Malignant melanoma Unknown site  
1p13 del(1)(p13) Mature B-cell neoplasm, NOS    
1p13 del(1)(p13) Mature T- and NK-cell neoplasm, NOS    
1p13 del(1)(p13) Meningioma Brain 13   
1p13 del(1)(p13) Mesothelioma Pleura  
1p13 del(1)(p13) Multiple myeloma   32   
1p13 del(1)(p13) Myxofibrosarcoma Soft tissue  
1p13 del(1)(p13) Neuroblastoma Adrenal  
1p13 del(1)(p13) Osteosarcoma, NOS Skeleton  
1p13 del(1)(p13) Peripheral T-cell lymphoma, unspecified    
1p13 del(1)(p13) Plasma cell leukemia    
1p13 del(1)(p13) Primitive neuroectodermal tumor/Medulloblastoma Cerebellum  
1p13 del(1)(p13) Refractory anemia    
1p13 del(1)(p13) Seminoma/Dysgerminoma Testis  
1p13 del(1)(p13) Squamous cell carcinoma Oral cavity  
1p13 del(1)(p13) Squamous cell carcinoma Lung  
1p13 del(1)(p13) Squamous cell carcinoma Tongue  
1p13 del(1)(p13) Teratoma (mature and immature) Testis  
1p13 del(1)(p13) Wilms tumor Kidney  
1p13 del(1)(p13p22) Acute lymphoblastic leukemia/lymphoblastic lymphoma    
1p13 del(1)(p13p22) Diffuse large B-cell lymphoma    
1p13 del(1)(p13p22) Mantle cell lymphoma    
1p13 del(1)(p13p22) Multiple myeloma   13   
1p13 del(1)(p13p31) Acute lymphoblastic leukemia/lymphoblastic lymphoma    
1p13 del(1)(p13p31) Mantle cell lymphoma    
1p13 del(1)(p13p31) Multiple myeloma   10   
1p13 del(1)(p13p31) Plasma cell leukemia    
1p13 del(1)(p13p32) Mesothelioma Pleura  
1p13 del(1)(p13p32) Multiple myeloma   14   
1p13 del(1)(p13p36) Multiple myeloma    
1p13 der(1)t(1;1)(p13;q25) Squamous cell carcinoma Oral cavity  
1p13 der(1)t(1;14)(p13;q11) Adenocarcinoma Kidney  
1p13 der(1)t(1;19)(p13;p13) Idiopathic myelofibrosis    
1p13 der(1)t(1;19)(p13;p13) Refractory anemia with ringed sideroblasts    
1p13 der(1)t(1;22)(p13;q13) Acute megakaryoblastic leukemia (FAB type M7)   10   
1p13 der(1)t(1;8)(p13;q11) Adenocarcinoma Breast  
1p13 der(17)t(1;17)(p13;p11) Acute lymphoblastic leukemia/lymphoblastic lymphoma    
1p13 der(8)t(1;8)(p13;q24) Multiple myeloma    
1p13 dic(1;11)(p13;p13) Meningioma Brain  
1p13 dic(1;9)(p13;p22) Mesothelioma Pleura  
1p13 dup(1)(p13p32) Mature B-cell neoplasm, NOS    
1p13 idic(1)(p13) Neuroblastoma Soft tissue