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SAGE Genie
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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

All Tags in Gene


Search query: SERPINA1 (Serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1), Gene Info

List of Tags for Gene

TagFreq.DatabaseRankVirtual Tag Classification¹AccessionLT
Viewer
Digital NorthernSAGE Anatomic Viewer²
GGAAAAGTGG* 2397 mgc_p5s 94.1% reliable 3' end BC011991 LTV DN
GGAAAAGTGG* 2397 mgc_p5s 94.1% reliable 3' end BC015642 LTV DN
GGAAAAGTGG* 2397 fl_p5s 92.8% reliable 3' end AK026174 LTV DN
GGAAAAGTGG* 2397 fl_p5s 92.8% reliable 3' end BC070163 LTV DN
ATTCAGTCTA 18 refseq_sr 90.6% reliable 3' end NM_000295 LTV DN
ATTCAGTCTA 18 refseq_sr 90.6% reliable 3' end NM_001002235 LTV DN
ATTCAGTCTA 18 refseq_sr 90.6% reliable 3' end NM_001002236 LTV DN
ATTCAGTCTA 18 refseq_sr 90.6% reliable 3' end NM_001127700 LTV DN
ATTCAGTCTA 18 refseq_sr 90.6% reliable 3' end NM_001127701 LTV DN
ATTCAGTCTA 18 refseq_sr 90.6% reliable 3' end NM_001127702 LTV DN
ATTCAGTCTA 18 refseq_sr 90.6% reliable 3' end NM_001127703 LTV DN
ATTCAGTCTA 18 refseq_sr 90.6% reliable 3' end NM_001127704 LTV DN
ATTCAGTCTA 18 refseq_sr 90.6% reliable 3' end NM_001127705 LTV DN
ATTCAGTCTA 18 refseq_sr 90.6% reliable 3' end NM_001127706 LTV DN
ATTCAGTCTA 18 refseq_sr 90.6% reliable 3' end NM_001127707 LTV DN
GGAAAAGTGG* 2397 fl_sr 89.1% reliable 3' end DQ682455 LTV DN
GGAAAAGTGG* 2397 fl_sr 89.1% reliable 3' end K01396 LTV DN
GGAAAAGTGG* 2397 fl_sr 89.1% reliable 3' end M11465 LTV DN
GGAAAAGTGG* 2397 fl_sr 89.1% reliable 3' end V00496 LTV DN
GGAAAAGTGG* 2397 fl_sr 89.1% reliable 3' end X01683 LTV DN
GGAAAAGTGG* 2397 fl_sr 89.1% reliable 3' end X02920 LTV DN
TTTAACATCC 34 fl_sr 89.1% reliable 3' end X17122 LTV DN
TCTATCCCCC 46 mgc_p5s 76.6% internal tag BC011991 LTV DN
TCTATCCCCC 46 mgc_p5s 76.6% internal tag BC015642 LTV DN
TCTATCCCCC 46 fl_p5s 73.8% internal tag AK026174 LTV DN
TCTATCCCCC 46 fl_p5s 73.8% internal tag BC070163 LTV DN
AATGTGTACT 21 refseq_apa 69.6% shorter alternative transcript NM_000295 LTV DN
AATGTGTACT 21 refseq_apa 69.6% shorter alternative transcript NM_001002235 LTV DN
AATGTGTACT 21 refseq_apa 69.6% shorter alternative transcript NM_001002236 LTV DN
AATGTGTACT 21 refseq_apa 69.6% shorter alternative transcript NM_001127700 LTV DN
AATGTGTACT 21 refseq_apa 69.6% shorter alternative transcript NM_001127701 LTV DN
AATGTGTACT 21 refseq_apa 69.6% shorter alternative transcript NM_001127702 LTV DN
AATGTGTACT 21 refseq_apa 69.6% shorter alternative transcript NM_001127703 LTV DN
AATGTGTACT 21 refseq_apa 69.6% shorter alternative transcript NM_001127704 LTV DN
AATGTGTACT 21 refseq_apa 69.6% shorter alternative transcript NM_001127705 LTV DN
AATGTGTACT 21 refseq_apa 69.6% shorter alternative transcript NM_001127706 LTV DN
AATGTGTACT 21 refseq_apa 69.6% shorter alternative transcript NM_001127707 LTV DN
CAGCCTGACT 1 refseq_apa 69.6% shorter alternative transcript NM_000295 LTV DN
CAGCCTGACT 1 refseq_apa 69.6% shorter alternative transcript NM_001002235 LTV DN
CAGCCTGACT 1 refseq_apa 69.6% shorter alternative transcript NM_001002236 LTV DN
CAGCCTGACT 1 refseq_apa 69.6% shorter alternative transcript NM_001127700 LTV DN
CAGCCTGACT 1 refseq_apa 69.6% shorter alternative transcript NM_001127701 LTV DN
CAGCCTGACT 1 refseq_apa 69.6% shorter alternative transcript NM_001127702 LTV DN
CAGCCTGACT 1 refseq_apa 69.6% shorter alternative transcript NM_001127703 LTV DN
CAGCCTGACT 1 refseq_apa 69.6% shorter alternative transcript NM_001127704 LTV DN
CAGCCTGACT 1 refseq_apa 69.6% shorter alternative transcript NM_001127705 LTV DN
CAGCCTGACT 1 refseq_apa 69.6% shorter alternative transcript NM_001127706 LTV DN
CAGCCTGACT 1 refseq_apa 69.6% shorter alternative transcript NM_001127707 LTV DN
GGGCAACAAG 9 refseq_apa 69.6% shorter alternative transcript NM_000295 LTV DN
GGGCAACAAG 9 refseq_apa 69.6% shorter alternative transcript NM_001002235 LTV DN
GGGCAACAAG 9 refseq_apa 69.6% shorter alternative transcript NM_001002236 LTV DN
GGGCAACAAG 9 refseq_apa 69.6% shorter alternative transcript NM_001127700 LTV DN
GGGCAACAAG 9 refseq_apa 69.6% shorter alternative transcript NM_001127701 LTV DN
GGGCAACAAG 9 refseq_apa 69.6% shorter alternative transcript NM_001127702 LTV DN
GGGCAACAAG 9 refseq_apa 69.6% shorter alternative transcript NM_001127703 LTV DN
GGGCAACAAG 9 refseq_apa 69.6% shorter alternative transcript NM_001127704 LTV DN
GGGCAACAAG 9 refseq_apa 69.6% shorter alternative transcript NM_001127705 LTV DN
GGGCAACAAG 9 refseq_apa 69.6% shorter alternative transcript NM_001127706 LTV DN
GGGCAACAAG 9 refseq_apa 69.6% shorter alternative transcript NM_001127707 LTV DN
AAGGCTTCCA 202 mgc_apa 69.1% shorter alternative transcript BC011991 LTV DN
AAGGCTTCCA 202 mgc_apa 69.1% shorter alternative transcript BC015642 LTV DN
TTTAACATCC 34 mgc_apa 69.1% shorter alternative transcript BC011991 LTV DN
TTTAACATCC 34 mgc_apa 69.1% shorter alternative transcript BC015642 LTV DN
TTTTTAGAGG* 14 mgc_apa 69.1% shorter alternative transcript BC011991 LTV DN
TCTATCCCCC 46 fl_sr 67.9% internal tag DQ682455 LTV DN
TCTATCCCCC 46 fl_sr 67.9% internal tag K01396 LTV DN
TCTATCCCCC 46 fl_sr 67.9% internal tag V00496 LTV DN
TCTATCCCCC 46 fl_sr 67.9% internal tag X01683 LTV DN
TCTATCCCCC 46 fl_sr 67.9% internal tag X02920 LTV DN
TTTTTAGAGG* 14 fl_sr 67.9% internal tag M11465 LTV DN
AAGGCTTCCA 202 fl_apa 67.6% shorter alternative transcript AK026174 LTV DN
AAGGCTTCCA 202 fl_apa 67.6% shorter alternative transcript BT019455 LTV DN
AAGGCTTCCA 202 fl_apa 67.6% shorter alternative transcript DQ682455 LTV DN
AAGGCTTCCA 202 fl_apa 67.6% shorter alternative transcript K01396 LTV DN
AAGGCTTCCA 202 fl_apa 67.6% shorter alternative transcript M11465 LTV DN
AAGGCTTCCA 202 fl_apa 67.6% shorter alternative transcript X01683 LTV DN
ATCAGGATCA 9 fl_apa 67.6% shorter alternative transcript BC070163 LTV DN
TCTATCCCCC 46 fl_apa 67.6% shorter alternative transcript BT019455 LTV DN
TTTAACATCC 34 fl_apa 67.6% shorter alternative transcript AK026174 LTV DN
TTTAACATCC 34 fl_apa 67.6% shorter alternative transcript BC070163 LTV DN
TTTAACATCC 34 fl_apa 67.6% shorter alternative transcript BT019455 LTV DN
TTTAACATCC 34 fl_apa 67.6% shorter alternative transcript DQ682455 LTV DN
TTTAACATCC 34 fl_apa 67.6% shorter alternative transcript K01396 LTV DN
TTTAACATCC 34 fl_apa 67.6% shorter alternative transcript M11465 LTV DN
TTTAACATCC 34 fl_apa 67.6% shorter alternative transcript X01683 LTV DN
TTTTTAGAGG* 14 fl_apa 67.6% shorter alternative transcript AK026174 LTV DN
TTTTTAGAGG* 14 fl_apa 67.6% shorter alternative transcript V00496 LTV DN
CACTGCCTCC 0 fl_r 66.8% undefined 3' end X06096 LTV        
GGAAAAGTGG* 2397 fl_r 66.8% undefined 3' end BT019455 LTV DN
GGAAAAGTGG* 2397 fl_r 66.8% undefined 3' end M26123 LTV DN

Other Gene(s) Mapping to Above Tag(s)

TagFreq.DatabaseRankVirtual Tag Classification¹AccessionLT
Viewer
Gene
Symbol
NameGene Info
GGAAAAGTGG 2397 refseq_ip 77.2% internally primed site NM_032374 LTV APOPT1 Apoptogenic 1, mitochondrial Gene Info
TTTTTAGAGG 14 fl_r 66.8% undefined 3' end AK128425 LTV Hs.640079 CDNA FLJ46568 fis, clone THYMU3040986 Gene Info

Legend

TAG sequence Best tag for search query
¹ Position of virtual tag relative to the longest reliable sequence in database
² Tissues only
Tissues only
Cell lines only
Cell lines only
Tissues + Cell lines
Tissues + Cell lines
* Tag maps to other gene(s)
# Highly repetitive tag