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SAGE Genie
  • Human SAGE Genie Tools
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  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Best Gene for Tag

Search query:

TagFreq.Digital NorthernSAGE Anatomic Viewer²
TAAATATCTA 140 DN
Best Gene for Tag

Gene
Symbol
NameDatabaseRankVirtual Tag Classification¹AccessionLT
Viewer
Gene Info
    refseq_p5s 95.4% reliable 3' end NM_001040001 LTV  
View all tags for gene

Other Gene(s) for Tag

Gene
Symbol
NameDatabaseRankVirtual Tag Classification¹AccessionLT
Viewer
Gene Info
PTF1A Pancreas specific transcription factor, 1a refseq_p5s 95.4% reliable 3' end NM_178161 LTV Gene Info
MLLT4 Myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 fl_p5s 92.8% reliable 3' end AL161973 LTV Gene Info

Legend

¹ Position of virtual tag relative to the longest reliable sequence in database
² Tissues only
Tissues only
Cell lines only
Cell lines only
Tissues + Cell lines
Tissues + Cell lines
* Tag maps to other gene(s)
# Highly repetitive tag