Skip Navigation
National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Best Gene for Tag

Search query:

TagFreq.Digital NorthernSAGE Anatomic Viewer²
GTGGCGCGTG 1021 DN
Best Gene for Tag

Gene
Symbol
NameDatabaseRankVirtual Tag Classification¹AccessionLT
Viewer
Gene Info
HSCB HscB iron-sulfur cluster co-chaperone homolog (E. coli) refseq_p5s 95.4% reliable 3' end NM_172002 LTV Gene Info
View all tags for gene

Other Gene(s) for Tag

Gene
Symbol
NameDatabaseRankVirtual Tag Classification¹AccessionLT
Viewer
Gene Info
    mgc_p5s 94.1% reliable 3' end BC000004 LTV  
Hs.254117 CDNA clone IMAGE:5303125 fl_p5s 92.8% reliable 3' end BC036436 LTV Gene Info
Hs.677312 CDNA: FLJ21358 fis, clone COL02842 fl_p5r 86.6% reliable 3' end AK025011 LTV Gene Info
CARS2 Cysteinyl-tRNA synthetase 2, mitochondrial (putative) fl_p5r 86.6% reliable 3' end BC082264 LTV Gene Info
MCTS1 Malignant T cell amplified sequence 1 refseq_ip 77.2% internally primed site NM_014060 LTV Gene Info
ANKLE1 Ankyrin repeat and LEM domain containing 1 refseq_sr 68.8% internal tag NM_152363 LTV Gene Info
SEC31B SEC31 homolog B (S. cerevisiae) fl_r 66.8% undefined 3' end AK128343 LTV Gene Info
Hs.658179 Transcribed locus ug_p5s 66.5% reliable 3' end     Gene Info

Legend

¹ Position of virtual tag relative to the longest reliable sequence in database
² Tissues only
Tissues only
Cell lines only
Cell lines only
Tissues + Cell lines
Tissues + Cell lines
* Tag maps to other gene(s)
# Highly repetitive tag