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SAGE Genie
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  • Digital Karyotyping

Best Gene for Tag

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TagFreq.Digital NorthernSAGE Anatomic Viewer²
CCCTGCCTGA 117 DN
Best Gene for Tag

Gene
Symbol
NameDatabaseRankVirtual Tag Classification¹AccessionLT
Viewer
Gene Info
COL22A1 Collagen, type XXII, alpha 1 refseq_p5s 95.4% reliable 3' end NM_152888 LTV Gene Info
View all tags for gene

Other Gene(s) for Tag

Gene
Symbol
NameDatabaseRankVirtual Tag Classification¹AccessionLT
Viewer
Gene Info
    refseq_apa 69.6% shorter alternative transcript NM_020914 LTV  
    fl_apa 67.6% shorter alternative transcript AL161961 LTV  

Legend

¹ Position of virtual tag relative to the longest reliable sequence in database
² Tissues only
Tissues only
Cell lines only
Cell lines only
Tissues + Cell lines
Tissues + Cell lines
* Tag maps to other gene(s)
# Highly repetitive tag