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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SELL, selectin L
Sequence ID:NM_000655
NR_029467
RefSeqGene ID:NG_016132
Entrez Gene ID:6402
Ensembl ID:ENSG00000188404

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q23-q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 169660549 - 169680714

NM_000655 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11138169659805169660942
11391157169665675169665693
11581286169670700169670828
12871472169672395169672580
14731658169673708169673893
16591766169676482169676589
17672153169677557169677943
21542235169679576169679657
22362442169680636169680842

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4717456Full LengthBC020758selectin L

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000646  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000655 NP_000646 P14151 EGF
Lectin_C
Sushi

Related Sequences

 
mRNAGenPeptSwissProt
M25280 AAC63053 P14151
BC020758 AAH20758 Q8WW79
AY367061 AAQ67701 Q6ULR8
DQ891376 ABM82302  
DQ894554 ABM85480  
AK312673 BAG35555 P14151
AK298705 BAG60862 B4DQA0
X16070 CAA34203 P14151
X16150 CAA34275 P14151
X17519 CAB43536 P14151
X17519 CAB43537 P14151
AJ246000 CAB55488 P14151

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SELL NP_000646 R.norvegicus Sell 29259   NP_062050 77
M.musculus Sell 20343 Gene Info NP_035476 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta