Skip Navigation
National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools

Gene Info

Gene Information For:Hs. PTPRC, protein tyrosine phosphatase, receptor type, C
Sequence ID:NM_001267798
NM_002838
NM_080921
NR_052021
NM_080922
RefSeqGene ID:NG_007730
Entrez Gene ID:5788
Ensembl ID:ENSG00000081237

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
HEPATITIC C VIRUSCCR5
IFNG
IFNL3
MULTIPLE SCLEROSISCD24
CIITA
HLA-DQB1
HLA-DQB1
HLA-DRB1
HLA-DRB1
HLA-DRB1
IL7R
PDCD1
SEVERE COMBINED IMMUNODEFICIENCY, T CELL-NEGATIVE, B-CELL/NATURALKILLER-CELL POSITIVECD3D
CD3E
IL7R

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q31-q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 198608224 - 198664270

 Exon Info From UCSC:
NM_002838
NM_080921
NM_080922

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4565766IncompleteBC014239protein tyrosine phosphatase, receptor type, C
9093267IncompleteBC169206protein tyrosine phosphatase, receptor type, C
9093268IncompleteBC169207protein tyrosine phosphatase, receptor type, C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_563578  NP_002829  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001267798 NP_001254727      
NM_002838 NP_002829 P08575 EC 3.1.3.48 fn3
Y_phosphatase
NM_080921 NP_563578     fn3
Y_phosphatase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC014239 AAH14239 Q6PJK7  
BC017863 AAH17863 Q0VAE8  
BC121086 AAI21087 Q0VAE8  
BC121087 AAI21088 Q0VAE8  
BC127656 AAI27657 Q0VAE8  
BC127657 AAI27658 Q0VAE8  
BC148257 AAI48258 Q0VAE8  
AY567999 AAS75254 Q6Q1P2  
AK292131 BAF84820 P08575 EC 3.1.3.48
AK299986 BAG61807 B4DSZ5  
AK303539 BAG64565 B4E0V3  
Y00062 CAA68269 P08575 EC 3.1.3.48
Y00638 CAA68669 P08575 EC 3.1.3.48

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PTPRC NP_002829 M.musculus Ptprc 19264 Gene Info NP_001104786 70
R.norvegicus Ptprc 24699   NP_612516 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

NCI-Nature Pathway Interaction Database

BioCarta Pathways
Pathway information courtesy of BioCarta