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Gene Info

Gene Information For:Hs. TBP, TATA box binding protein
Sequence ID:NM_001172085
NM_003194
RefSeqGene ID:NG_008165
Entrez Gene ID:6908
Ensembl ID:ENSG00000112592

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
PARKINSON DISEASEADH1C
DBH
DRD4
FGF20
GBA
MAPT
NDUFV2
NR4A2
SNCAIP
UCHL1
SPINOCEREBELLAR ATAXIA 17 

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q27Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 170863469 - 170881625

 Exon Info From UCSC:
NM_001172085
NM_003194

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5761426Full LengthBC110341TATA box binding protein
40032492Full LengthBC109053TATA box binding protein
40032493Full LengthBC109054TATA box binding protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003185  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001172085 NP_001165556    
NM_003194 NP_003185 P20226 TBP

Related Sequences

 
mRNAGenPeptSwissProt
M55654 AAA36731 P20226
M34960 AAC03409 P20226
BC109053 AAI09054 Q32MN7
BC109054 AAI09055 Q32MN6
BC110341 AAI10342 Q32MN7
BT019657 AAV38463 Q5U0C8
EU831861 ACE86620  
EU831783 ACE87301  
EU832760 ACE87771  
FJ770048 ACN86311 C0LUL1
GQ129302 ACT64436  
AK298272 BAG60533 B4DPC1
AK304648 BAG65425 B4E3B3
X54993 CAA38736 P20226
CR456776 CAG33057 P20226

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TBP NP_003185 M.musculus Tbp 21374 Gene Info NP_038712 98
R.norvegicus Tbp 117526   NP_001004198 97
A.thaliana TBP2 841999   NP_175948 81
A.thaliana TBP1 820546   NP_187953 80
A.gambiae AgaP_AGAP010958 1271006   XP_309748 74
D.melanogaster Tbp 37476   NP_523805 68
C.elegans tbp-1 176054   NP_498635 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

NCI-Nature Pathway Interaction Database

BioCarta Pathways
Pathway information courtesy of BioCarta