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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CYLD, Cylindromatosis (turban tumor syndrome)
Sequence ID:NM_015247
NM_001042412
NM_001042355
RefSeqGene ID:NG_012061
Entrez Gene ID:1540
Ensembl ID:ENSG00000083799

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 50776020 - 50830797

 Exon Info From UCSC:
NM_015247
NM_001042412
NM_001042355

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4552767Full LengthBC012342cylindromatosis (turban tumor syndrome)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056062  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001042355 NP_001035814      
NM_001042412 NP_001035877      
NM_015247 NP_056062 Q9NQC7 EC 3.4.19.12 CAP_GLY

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF161542 AAF29029 Q9NQC7 EC 3.4.19.12
BC012342 AAH12342 Q9NQC7 EC 3.4.19.12
AK292975 BAF85664 A8KAB0  
AK024212 BAG51271 B3KNA9  
AK024348 BAG51293 B3KND1  
AJ250014 CAB93533 Q9NQC7 EC 3.4.19.12
FN823255 CBL94217 D6CJC5  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CYLD NP_056062 M.musculus Cyld 74256 Gene Info NP_001121642 95
R.norvegicus Cyld 312937   NP_001017380 94
A.gambiae AgaP_AGAP008412 1277567   XP_317037 50
D.melanogaster CYLD 34380   NP_723556 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

NCI-Nature Pathway Interaction Database