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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. L1CAM, L1 cell adhesion molecule
Sequence ID:NM_000425
NM_001143963
NM_024003
RefSeqGene ID:NG_009645
Entrez Gene ID:3897
Ensembl ID:ENSG00000198910

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
CORPUS CALLOSUM, PARTIAL AGENESIS OF 
CRASH SYNDROME 
HIRSCHSPRUNG DISEASEEDN3
GDNF
NRTN
PHOX2B
RET
HYDROCEPHALUS DUE TO AQUEDUCTAL STENOSIS 

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq28Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 153128117 - 153141285

 Exon Info From UCSC:
NM_000425
NM_001143963
NM_024003

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8991945Full LengthBC126229L1 cell adhesion molecule
9020436Full LengthBC136447L1 cell adhesion molecule
4907142IncompleteBC025843L1 cell adhesion molecule

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000416  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000425 NP_000416 P32004 fn3
ig
I-set
NM_001143963 NP_001137435    
NM_024003 NP_076493    

Related Sequences

 
mRNAGenPeptSwissProt
M55271 AAA36353 P32004
M74387 AAA59476 P32004
M77640 AAC14352 P32004
BC025843 AAH25843 P32004
BC126229 AAI26230 P32004
BC136447 AAI36448 P32004
EF506611 ABP88252 A4ZYW4
AB102653 BAC81122 Q7Z3Z9
AK289754 BAF82443 A8K139
X59847 CAA42508 P32004
X58776 CAB37831 P32004

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens L1CAM NP_000416 M.musculus L1cam 16728 Gene Info NP_032504 89
R.norvegicus L1cam 50687   NP_059041 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

NCI-Nature Pathway Interaction Database