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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TRPV4, Transient receptor potential cation channel, subfamily V, member 4
Sequence ID:NM_021625
NM_001177431
NM_001177428
NM_147204
NM_001177433
RefSeqGene ID:NG_017090
Entrez Gene ID:59341
Ensembl ID:ENSG00000111199

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
BRACHYOLMIA TYPE 3 
HEREDITARY MOTOR AND SENSORY NEUROPATHY, TYPE IIC 
METATROPIC DYSPLASIA 
PARASTREMMATIC DWARFISM 
SCAPULOPERONEAL SPINALMUSCULAR ATROPHY 
SED, MAROTEAUX TYPE 
SPINAL MUSCULAR ATROPHY, DISTAL, CONGENITAL NONPROGRESSIVE 
SPONDYLOMETAPHYSEAL DYSPLASIA,KOZLOWSKI TYPECOL2A1
[SODIUM SERUM LEVEL QTL 1] 

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 110220891 - 110252696

 Exon Info From UCSC:
NM_021625
NM_001177431
NM_001177428
NM_147204
NM_001177433

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9051820Full LengthBC143315transient receptor potential cation channel, subfamily V, member 4
40125977Full LengthBC117426transient receptor potential cation channel, subfamily V, member 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067638  NP_671737  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001177428 NP_001170899    
NM_001177431 NP_001170902    
NM_001177433 NP_001170904    
NM_021625 NP_067638 Q9HBA0 Ank
Ion_trans
NM_147204 NP_671737   Ank
Ion_trans

Related Sequences

 
mRNAGenPeptSwissProt
AF258465 AAG16127 Q9HBA0
AF263523 AAG28029 Q9HBA0
BC117426 AAI17427 Q9HBA0
BC143315 AAI43316 Q9HBA0
AF279673 AAK69487 Q9HBA0
DQ059644 AAZ04918 Q9HBA0
DQ059645 AAZ04919 Q9HBA0
DQ059646 AAZ04920 Q9HBA0
AB032427 BAB69040 Q9HBA0
AB073669 BAC06573 Q9HBA0
AB100308 BAC55864 Q9HBA0
AJ296305 CAC82937 Q9HBA0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRPV4 NP_067638 R.norvegicus Trpv4 66026   NP_076460 95
M.musculus Trpv4 63873 Gene Info NP_071300 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta