Skip Navigation
National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools

Gene Info

Gene Information For:Hs. VPS35, Vacuolar protein sorting 35 homolog (S. cerevisiae)
Sequence ID:NM_018206
RefSeqGene ID:NG_029970
Entrez Gene ID:55737
Ensembl ID:ENSG00000069329

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 46694120 - 46723086

 Exon Info From UCSC:
NM_018206

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3162255Full LengthBC002414vacuolar protein sorting 35 homolog (S. cerevisiae)
4249949Full LengthBC010362vacuolar protein sorting 35 homolog (S. cerevisiae)
30340379Full LengthBC093036vacuolar protein sorting 35 homolog (S. cerevisiae)
5273475IncompleteBC041367vacuolar protein sorting 35 (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060676  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018206 NP_060676 Q96QK1 Vps35

Related Sequences

 
mRNAGenPeptSwissProt
AF191298 AAF02778 Q96QK1
AF175265 AAF89953 Q96QK1
AY007112 AAG01989 Q96QK1
AF183418 AAG09687 Q96QK1
AF186382 AAG40619 Q96QK1
BC002414 AAH02414 Q96QK1
BC010362 AAH10362 Q96QK1
BC093036 AAH93036 Q96QK1
AK000395 BAA91137 Q96QK1
AK001614 BAA91790 Q96QK1
AK023650 BAB14626 Q96QK1
AK223218 BAD96938 Q53FR4
AL136888 CAB66822 Q96QK1
AL512769 CAC21686 Q96QK1
BX647213 CAI46268 Q5HYM2
AM393740 CAL38615  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens VPS35 NP_060676 M.musculus Vps35 65114 Gene Info NP_075373 99
R.norvegicus Vps35 25479   NP_001099188 99
A.gambiae AgaP_AGAP007683 1269546   XP_308188 65
D.melanogaster Vps35 37536   NP_611651 63
C.elegans vps-35 174000   NP_495180 50
N.crassa NCU06284 3878721   XP_962546 47
A.thaliana VPS35B 843918   NP_177713 45
S.cerevisiae VPS35 853287   NP_012381 38
S.pombe vps35 2539462   NP_588260 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)