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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CPT1B, Carnitine palmitoyltransferase 1B (muscle)
Sequence ID:NM_152245
NM_004377
NM_001145137
NM_001145135
NM_152246
NM_001145134
NM_001145136
RefSeqGene ID:NG_012643
Entrez Gene ID:1375
Ensembl ID:ENSG00000205560

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 51007291 - 51016996

 Exon Info From UCSC:
NM_152245
NM_004377
NM_001145137
NM_001145135
NM_152246
NM_001145134
NM_001145136

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860341Full LengthBC142954carnitine palmitoyltransferase 1B (muscle)
40108355Full LengthBC131570carnitine palmitoyltransferase 1B (muscle)
4634352IncompleteBC021130carnitine palmitoyltransferase 1B (muscle)
100000785BC143071carnitine palmitoyltransferase 1B (muscle)
100013586BC150318carnitine palmitoyltransferase 1B (muscle)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004368  NP_689451  NP_689452  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001145134 NP_001138606      
NM_001145135 NP_001138607      
NM_001145136 NP_001138608      
NM_001145137 NP_001138609      
NM_004377 NP_004368 Q92523 EC 2.3.1.21 Carn_acyltransf
NM_152245 NP_689451 Q92523 EC 2.3.1.21 Carn_acyltransf
NM_152246 NP_689452 Q92523 EC 2.3.1.21 Carn_acyltransf

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U66828 AAB40651 Q92523 EC 2.3.1.21
U62733 AAC51122 Q92523 EC 2.3.1.21
BC131570 AAI31571 A2RRE8  
BC142954 AAI42955 A5PLL0  
BC143071 AAI43072    
BC150318 AAI50319    
D87812 BAA13461 Q92523 EC 2.3.1.21
AB051457 BAB33340 Q92523 EC 2.3.1.21
AK223174 BAD96894 Q53FV7  
AK291316 BAF84005 A8K5K1  
AK297866 BAH12680 Q92523 EC 2.3.1.21
AK299395 BAH13024 Q92523 EC 2.3.1.21
AK301477 BAH13492 B7Z756  
Y08682 CAA69938 Q92523 EC 2.3.1.21
Y08683 CAA69939 Q92523 EC 2.3.1.21

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CPT1B NP_001138607 M.musculus Cpt1b 12895 Gene Info NP_034078 87
R.norvegicus Cpt1b 25756   NP_037332 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

NCI-Nature Pathway Interaction Database